Helianthus annuus (common sunflower): 110907736
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Entry
110907736 CDS
T05101
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110907736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
han03400
]
110907736
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110907736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Lyase_8_N
Motif
Other DBs
NCBI-GeneID:
110907736
NCBI-ProteinID:
XP_022008364
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All DBs
Position
16:complement(166912616..166917932)
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AA seq
1122 aa
AA seq
DB search
MDNYNYNLFVPVAKRTRLQTAQGFSGSAHNRSRKRNREPGFSTGCGVDDHEVIDVDDDDD
DDDDDDDCSASEPTVQHESDDKIKCYGSASPFKAGTHTYDRYSDVSDEEGFSGPARNQSR
TRDHEVIDVDDDCRSFESNIQHEPDDTNHTIKCYGSASPFKTGTDTYVHYKDDSDEEETD
DTSEDLKASGNLNNTDSDPFWSTEDESSSSSEFKKPNFKRFLSQLNKRPYGTRTNPLSFL
DSSDSDEHEGDGYVNLEEHEVSCKYDHRSQKDTKASSFQFTEDVPIDSSESESDDLDDTD
LLSVNKRPHRRTQNDKEKAWSGSASRKAKSPSVHKTNTKSTCQIPRDESSDTEVNEKQNT
IDKLISRYLKDDKAKSVKNGKFKKAGRRDVAACINAILESVINNEEEHITQEDECLPSHF
KFEDTEDESSQKSIESNGEELFEEMEFALKCDEVGSYRIPQVENREEVDYYDDNDLCENG
EHGDTYFEEQTGLRCLLCGDVLVESRYVIPKLASYAPDRSNRRPHFDEQQFFSHENPYYM
DLDSNPYDTCKQTKGTVWELIPTHIQARMYSHQQEGFEFLWNNLAGTIELSRLQKLCSRG
SGGVGGGGCIISHAPGTGKTFLTIVFMESFLKKFPKCCPVIIAPASMLLTWEDEFKKWRV
GISFINLHNTEHLRREMSFGSSTHNKDLIRAMKISSWTNGGSVLGVSYNLYEKLAGDSYS
YKNIDHEKIRTCLLDMPGLVVLDEGHTPRCEHSKIWNTLLKLKTRNRVILSGTPFQNNFR
ELFNMLKIVRPATANSIVKEKFFADMIQRRNMRKFRGRSRAEDIEKLKEIILPFVHVHKG
HILESRLPGLRQSVIFLNPSPFQKGFIENLGTLGSTFEYEHKVTLVAVHPSLILHCSLSE
KEENSINKQELEDVRLQPEVGVKTRFVMELIRLSLPLNEKVLIFSQFIHPQLLLQDQIAH
AFGWSVEKEITLIQGKIQQTRRQNIINAFNDPKSELKVLLASIRCCSEGIHLYGASRVVL
LDVVWNPSVEIQAISRAYRLGQKKVVYTYHLMAAGTTEEEKYDRQVEKWRLAEMVFSSAS
MAGGEPKNKVKVDDKILQEMVDNQELKDIFKKIRYPENQTRI
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggacaattacaactataacttgtttgtacctgtggccaaaagaaccaggcttcaaaca
gctcaagggttttctggttctgcacacaatcgatctcgaaagcgaaaccgagaacccggg
tttagtacagggtgtggtgttgatgatcatgaagttattgatgttgatgatgatgatgat
gatgatgatgatgatgatgattgcagtgcttctgaaccaactgttcaacatgaatcagat
gataagatcaaatgttacggttcagcaagtccgtttaaagccgggacacatacttacgat
cgttactcagatgtatcggatgaagaagggttttccggtcctgcacgcaatcaatctcga
acgcgtgatcatgaagttattgatgttgatgatgattgcagatcttttgaatcaaatatt
caacatgaaccagatgatacaaatcatacgatcaaatgttacggttcagcaagtcctttt
aaaaccgggacagatacttacgttcattacaaagatgactcggatgaagaagagactgat
gacacatctgaggatcttaaagcatctggtaatcttaacaacacggattcagacccgttt
tggtctactgaagacgagtcatctagttctagtgaattcaagaagccaaactttaaaaga
tttttatcacaattgaacaagaggccatacggcaccagaaccaacccattatccttttta
gatagctcagattcagatgaacatgaaggtgatggatatgtgaatcttgaagaacatgaa
gtatcctgcaaatatgatcatagaagtcaaaaggatacgaaagcgagctcgtttcagttt
actgaagatgtgccaattgattctagtgaaagtgagagtgatgacttggatgatactgac
cttttatcggtaaacaagaggccgcatcggcgcacacaaaacgataaggaaaaagcttgg
tctggatcagcgtcccgaaaagcgaagagcccttctgtacacaaaacaaatacgaaaagt
acgtgtcaaataccaagggatgaatcgagtgatacagaagtaaatgaaaaacaaaataca
atagacaaattaatcagtcgttacctgaaagatgataaagcaaaatcggtcaaaaatgga
aaatttaagaaggctggtcgaagagatgtcgctgcatgtataaatgctattttggagtcc
gttattaataatgaagaagagcatataacacaggaagatgagtgtcttccttcacatttc
aaatttgaagacactgaggacgagtcgagtcaaaaaagtatcgaatcaaacggggaagaa
ttatttgaagagatggagtttgcactcaaatgtgatgaagttggttcctatagaattccc
caggtcgagaatcgagaggaagtcgattattatgatgacaatgacctttgcgagaacgga
gaacacggtgatacttactttgaagaacaaacaggcttgagatgtcttttatgtggagat
gtccttgttgagagcagatatgttataccgaagctagcaagctatgcacctgataggtct
aatagaaggccgcattttgatgaacaacagttttttagtcatgaaaacccatattacatg
gatttagattcgaatccttatgacacttgcaagcagaccaaaggaacggtctgggaactc
atcccaacgcatattcaggcacgcatgtattcccatcaacaagaaggatttgagtttttg
tggaataatttggcgggaactattgagctctcaagattacaaaaactttgttcacgtggt
agtggcggtgttggcggtgggggctgcatcatctcacatgcccctggcacgggtaaaact
ttcttgacaattgtgtttatggagtcatttctcaagaaatttcccaaatgttgtccagtc
ataattgctccggctagcatgcttctaacatgggaagacgaattcaaaaaatggcgagtc
gggatttccttcattaacttgcacaacactgagcatttgagaagagaaatgagttttggt
agttccacacataataaagatttgatacgtgctatgaagataagttcttggactaacggt
ggaagtgttcttggagtaagctacaatttgtatgaaaaactagctggggattcgtactcg
tataagaacatagatcatgaaaaaataaggacgtgtttgctggatatgccaggactagta
gttcttgatgaaggacacacgccccgttgcgaacacagtaaaatctggaacacgcttttg
aagttaaagaccagaaaccgagtgatcttatctggaaccccatttcaaaacaatttcagg
gaattgtttaacatgctgaaaatagtaaggccagcaaccgcaaatagcattgtgaaggaa
aagttttttgcagatatgattcagcgtaggaacatgaggaaatttagaggtagatcgagg
gccgaagatattgagaagctcaaggagatcattctgccttttgttcatgttcataaagga
catatcttggaaagcaggcttcctggtttgagacaaagtgtcatttttctaaacccttca
ccatttcaaaaaggttttattgaaaatctgggaactttaggaagcacttttgagtatgaa
cataaagttactttggtggcggttcatccgtcattaatccttcactgctcgttatctgaa
aaagaagaaaactcgataaacaaacaagaacttgaagatgtgagactgcagcctgaagtt
ggtgtgaaaacaaggtttgtcatggagctgattcgccttagtcttcctttgaatgaaaag
gttttgatctttagtcagtttatccatccacaacttttgttacaagatcaaatcgcccat
gcttttggttggagcgttgagaaggagatcacactcatacaaggaaagatacaacagacg
cgcaggcaaaatataataaacgcttttaacgatcccaagagtgaactgaaagtgttgttg
gcatctataagatgttgttctgaagggattcatctttatggtgcttctcgggtggttctt
ttggatgtcgtttggaacccgtctgtagaaatacaagctattagcagggcttataggctt
ggtcagaagaaagtggtgtacacgtaccacttgatggcggctggcaccaccgaggaggag
aagtatgatagacaagtagagaaatggcggttagcagagatggttttttcttcggcttcc
atggctggcggggagccgaagaacaaggtgaaagtggatgataagatcttgcaagaaatg
gtggataaccaagaactgaaagatatcttcaagaagatcaggtatcctgaaaatcaaact
agaatttga
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