Helianthus annuus (common sunflower): 110907738
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Entry
110907738 CDS
T05101
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110907738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
han03400
]
110907738
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110907738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
110907738
NCBI-ProteinID:
XP_035841537
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All DBs
Position
16:complement(166866727..166871067)
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AA seq
961 aa
AA seq
DB search
MFLNVRILTETDDTDEDLKASGNLSNTNADPFWSTEDESSSSSEFKKPNFKRFLSQLNKR
PYGTTTNPLSVFDNSDSDEHEGDGYVNLEEHEDAIVALPVSCKYDRGSRKDTKASSFQFT
EDVPIDSSERESDDLDGADLLPVNKRPHRRTQNDKEKVWSGSASRKEKSPSVRKPNMKNT
CQIPMDEPSDTEVNEKQNTIDELISRNVKGDIAKSVKSGKFKKGGRRDVAACINAILESV
INNEEDHITQEDECLPSHFKFDDTEDESSQKSIESNGEELFEEMEFALKCDEVGSYRIPQ
VENQEEVNHYDDNGLCENGVHGETYFEEQTGLRCLLCGDVLVESRYVIPKLASYAPDRSN
RRRHFDEQQFFSHENPYYMDLDSNPYDTCKQTKGTVWELIPTHIQARMYSHQQEGFEFLW
NNLAGTIELSRLQKLCSRGSGGVGGGGCIISHAPGTGKTFLTIVFMESFLKKFPKCCPVI
IAPASMLLTWEAEFKKWRVGISFINLHNTEHLRKEMTFGSSTRNKDLIRAMKISSWTNGG
SVLGVSYNLYEKLAGDSYSYKNIDHEKIRTCLLDMPGLVVLDEGHTPRCEHSKIWNTLLK
LKTRNRVILSGTPFQNNFRELFNTLKIVRPATANSIVKEKFFADMIQRRNMRNFRGRSRA
EDIEKLKEIILPFVHVHKGHILESKLPGLRQSVIFLNPSPFQKGFIDNLGTLASTFEYEH
KVTLVAVHPSLILHCSLSEKEENSINKQELEDVRLQPEVGVKTRFVMELIRLSLSLNEKV
LIFSQYIQPQLLLQDQIAHVFGWSVEKEITLIQGKIQQTRRQNIINAFNDPKSELKVLLA
SIRCCSEGIHLYGASRVVLLDVVWNPSVEIQAISRAYRLGQKKVVYTYHLMAAGTTEEEK
YDRQVEKWRLAEMVFSSASMAGGEPKNKVKVDDKILQEMVDNQELKDIFKKIRYPENQTR
I
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgtttctaaatgttagaatcttaacagagactgatgacaccgatgaggatcttaaagca
tctggtaatcttagcaacacgaatgcagacccgttttggtctactgaagacgagtcatct
agttctagcgaattcaagaagcctaactttaaaagatttttatcacaattgaacaagagg
ccatacggcaccacaaccaacccattatctgttttcgataactcagattcagatgaacat
gaaggtgatggatatgtgaatcttgaagaacatgaagatgctattgtggcacttccagta
tcctgcaaatatgaccgtggaagtcgaaaggatacgaaagcgagctcgtttcagtttact
gaagatgtgccaattgattctagtgaaagggagagtgatgacttggatggtgctgacctt
ttaccagtaaacaagaggccgcatcggcgcacacaaaacgataaggaaaaagtttggtct
ggatcagcttcccgaaaagagaagagtccttctgtacgcaaaccaaacatgaaaaatacg
tgtcaaataccaatggatgaaccgagtgatacagaagttaatgaaaaacaaaatacaata
gacgaattaatcagtcgtaacgtgaaaggtgatatagcaaaatcggtcaaaagtggaaaa
tttaagaagggtggtcgaagagatgtcgccgcatgtataaatgctattttggagtccgtt
attaataatgaagaagatcatataacacaggaagatgagtgtcttccttcacatttcaaa
tttgacgacactgaggacgagtcgagtcaaaaaagtatcgaatcaaacggggaagaatta
tttgaagagatggagtttgcactcaaatgtgatgaagttggttcctacagaattccccag
gtcgagaatcaagaggaagtcaatcattacgacgataatggcctttgcgaaaacggagtg
cacggtgaaacttactttgaagaacaaacaggcttgagatgtcttttatgcggagatgtc
cttgttgagagcagatatgttataccgaagctagcaagctatgcacctgataggtctaat
agaaggcggcattttgatgaacaacagttttttagtcatgaaaacccatattacatggat
ttagattcgaatccttatgacacttgcaagcagaccaaaggaacggtctgggaactcatc
ccaacgcatattcaggcacgcatgtattcccatcaacaagaaggatttgagtttttgtgg
aataatttggcgggaactattgagctctcaagattacaaaaactttgttcacgtggtagt
ggcggtgttggcggtgggggctgcatcatctcacatgcccctggcacgggtaaaactttc
ttgacaattgtgtttatggagtcatttctcaagaaatttcccaagtgttgtccagtcata
attgctccggctagcatgcttctaacatgggaagccgaatttaaaaaatggcgagtcggc
atttcgtttatcaacttacacaacactgagcatttgagaaaagaaatgacttttgggagt
tccacacgtaataaagatttaatacgtgctatgaagataagttcttggaccaacggtgga
agtgttcttggagtaagctacaatttgtatgaaaaacttgctggggattcgtattcgtat
aagaacatagatcatgaaaaaataaggacgtgtttgctggatatgccgggactcgtagtt
cttgatgaaggacacacgccccgttgcgaacacagtaaaatctggaacacgcttttgaag
ttaaagaccagaaaccgagtgatcttatctggaaccccatttcaaaacaatttcagggaa
ttgtttaacacgctgaaaatagtaaggccagcaaccgcaaatagcattgtgaaggaaaag
ttttttgcagatatgattcagcgtaggaacatgaggaactttagaggtagatcgagggcc
gaagatattgagaagctcaaggagatcattctgccttttgttcatgttcataaaggacat
atcttggaaagcaagcttcccggtttgagacaaagtgtcatttttctaaatccttcacca
tttcaaaaaggttttattgataatttgggaactttagcaagcacttttgagtatgaacat
aaagttactttggtggcggttcatccgtcattaatccttcactgctcgttatctgaaaaa
gaagaaaactcgataaacaaacaagaacttgaagatgtgagactgcagcctgaagttggt
gtgaaaacaaggtttgtcatggagctgattcgccttagtctttcgttgaatgaaaaggtt
ttgatctttagtcaatatatccagccacaactgttgttacaagatcaaatcgcccatgtt
tttggttggagtgttgagaaggagatcacactcatacaaggaaagatacaacagacgcgc
aggcaaaatataataaacgcttttaacgatcccaagagtgaactgaaagtgttgttggca
tctataagatgttgttctgaagggattcatctttatggtgcttctcgggtggttcttttg
gatgtcgtttggaacccgtctgtagaaatacaagctattagcagggcttataggcttggt
cagaagaaagtggtgtacacgtaccacttgatggcggctggcaccaccgaggaggagaag
tatgatagacaagtagagaaatggcggttagcagagatggttttttcttcggcttccatg
gctggcggggagccgaagaacaaggtgaaagtggatgataagatcttgcaagaaatggtg
gataaccaagaactgaaagatatcttcaagaagatcaggtatcctgaaaatcaaactaga
atttga
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