Helianthus annuus (common sunflower): 110907815
Help
Entry
110907815 CDS
T05101
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Module
han_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110907815
Enzymes [BR:
han01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110907815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Gp49_Pectate_lyase_like
Beta_helix_3
Motif
Other DBs
NCBI-GeneID:
110907815
NCBI-ProteinID:
XP_022008434
LinkDB
All DBs
Position
2:171928096..171930098
Genome browser
AA seq
389 aa
AA seq
DB search
MVIKHIMVLLFLVFRLSSATVTYNVQTFGAKPDGRSDSKNAFLKAWNLSCNSTTPASIYV
PAGRYLIASALTFSGQGCKSRAITFNIAGTLVAPSSYNAIGNAQVWIKFYVVKSVTINGG
TLDAQGSSLWACKTSGKACPKGSTTLGFYHSQNIVISKLRSLNSQMFHMLLYSCKNAKIQ
GVSIVAPGLSPNTDGIHLTYSTGITILSSKISTGDDCVSIGPGNSNIWIEKVVCGPGHGI
SIGSLGWEREEPGVQNVTVKTTTFVGTTNGLRIKAWARSSNGFVNGVHFKGATMMNVKFP
IIIDGNYCPNNNNCPNEASGVKISNVMYENVHGTSATRVAVKFDCSKGNPCSGIVLKDVD
LKFGGQPANSSCSYAAGTASGLLQPTSCL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcaaacatatcatggtcttgctttttctagtttttcggttatcatccgcaacg
gttacatacaatgtccaaacttttggagccaagccagacggccgctcagactcaaagaac
gcgttcttgaaagcatggaatttgtcatgtaactctaccactcccgctagcatttatgtg
ccagctggcaggtacttgattgcctcggcgcttacattctctggtcaaggatgcaagagc
cgagccatcacattcaacatagctggtaccttggtggcaccatctagttataacgctatt
ggcaacgcgcaagtctggatcaagttctacgtagttaagagtgttaccataaacggtggg
acccttgatgcccaaggatcttctctatgggcctgcaaaacatctggaaaagcatgtcct
aaaggatctacgacgcttggcttctaccactcccaaaacatagtgatcagtaaattaagg
tcattaaacagccaaatgtttcacatgttgctctatagttgcaagaacgcgaaaatacaa
ggagttagcatcgtagcacctgggctcagcccgaacacagacggcatccatttaacatat
tccacaggaatcaccattttgagctctaaaatctcaacaggcgacgactgcgtctcgata
ggcccaggaaactctaatatctggatagaaaaggtggtttgtggacccggtcacggcata
agcattggaagtctagggtgggaacgagaagaacccggtgtccagaatgtaacagtaaaa
acgaccacattcgtaggtacaacgaacggtctgaggataaaagcatgggcgaggagtagc
aatgggttcgttaacggtgttcatttcaagggagcaacgatgatgaacgttaagttcccg
atcataatagacggaaattactgtccgaataataacaactgtcccaatgaggcttcagga
gtaaagatcagcaacgtgatgtacgaaaacgtgcatggaacatcagcaacacgcgtggca
gtgaagtttgattgcagcaaggggaatccgtgtagcggaattgtgttaaaggatgttgac
cttaaatttggaggtcaaccagcgaattcgtcttgctcgtatgctgcaggaactgcttct
ggattacttcaacctacaagttgcctgtaa
DBGET
integrated database retrieval system