Helianthus annuus (common sunflower): 110907872
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Entry
110907872 CDS
T05101
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Module
han_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110907872
Enzymes [BR:
han01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110907872
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix_3
Motif
Other DBs
NCBI-GeneID:
110907872
NCBI-ProteinID:
XP_022008485
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Position
2:172029114..172031121
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AA seq
389 aa
AA seq
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MVIKHIMVLLFLVFRLSSATVTYNVQSFGAKPDGRSDSKNAFFKAWTLSCNSTSPASIYV
PAGRYLIASALTFSGQGCKSRAITFNIAGTLVAPSSYNAIGNAQVWIKFYVVKNVTINGG
TLDAQGSSLWACKTSGKTCPKGSTTLGFYHSQNIVISKLRSLNSQMFHMLLYSCKNAKIQ
GVSIVAPGLSPNTDGIHLTYSTGITILSSKISTGDDCVSIGPGNSNIWIEKVVCGPGHGI
SIGSLGWEREEPGVQNVTVKTTTFVGTTNGLRIKAWARSSNGFVNGVYFKGATMMNVKFP
IIIDGNYCPNNNNCPNEASGVKISNVVYENVHGTSATRVAVKFDCSKGNPCRGIVLKDVD
LKFGGQPANSSCSYAAGTASGLLQPTSCL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcaaacatatcatggtcttgctttttctagtttttcggttatcatccgcaacg
gttacatacaatgtccaaagttttggagccaagccagacggccgctcagactcaaagaac
gcgttcttcaaagcatggactttgtcatgtaactctaccagtcccgctagcatttatgtg
ccagctggcaggtacttgattgcctcggcgcttacattctctggtcaaggatgtaaaagc
cgagccatcacattcaacatagctggtaccttggtggcaccatctagttataatgctatt
ggcaacgcgcaagtctggatcaagttctacgtagttaagaatgttaccataaacggtggg
acccttgatgcccaaggatcttctctatgggcctgcaaaacatctggaaaaacatgtcct
aaaggatctacgacacttggcttctaccattcccaaaacatagtgatcagtaaattaagg
tcattaaacagccaaatgtttcacatgttgctctatagttgcaagaacgcgaaaatacaa
ggagttagcatcgtagcacctgggctcagcccgaacacagatggcatccatttaacatat
tccacagggatcaccattttgagctctaaaatctcaacaggcgacgactgcgtctcgata
ggcccaggaaactctaatatctggatagaaaaggtggtttgtggacccggtcacggcata
agcattgggagtctagggtgggaacgagaagaaccaggtgtccagaatgtaacagtaaaa
acgaccacattcgtaggtacgacaaacggtctgaggataaaagcatgggcgaggagtagc
aatgggttcgttaacggtgtttatttcaagggagcaacgatgatgaacgttaagttcccg
atcataatagacggaaattactgtcccaataataacaactgtccgaatgaagcttcagga
gtaaagatcagcaacgtggtgtacgaaaatgtgcatggaacatcagcaacacgcgtggca
gtgaagtttgattgcagcaaggggaatccgtgtcgcggaattgtgttaaaggatgttgac
cttaaatttggaggtcaaccagcgaattcctcttgctcgtatgctgcaggcactgcttct
ggattacttcaacctacaagttgcctgtaa
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