Helianthus annuus (common sunflower): 110908069
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Entry
110908069 CDS
T05101
Name
(RefSeq) uncharacterized protein LOC110908069
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
han03016
]
110908069
Enzymes [BR:
han01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
110908069
Transfer RNA biogenesis [BR:
han03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110908069
Prokaryotic type
110908069
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
PRIMA1
Motif
Other DBs
NCBI-GeneID:
110908069
NCBI-ProteinID:
XP_022008670
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All DBs
Position
14:complement(11547111..11550058)
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AA seq
845 aa
AA seq
DB search
MENQTHVSPPPPLLPPPPPPSTTADSSSSDHNATISTDKNPRHKRKKVAILFAYCGAGYL
GMQKNPEAKTIEGELQQALCISGAIPKPDLHCPKIFDFARSARTDKGVSAVGQVVSGKFY
MDPPGFVERINNNLPDKFRVYGFKHVTASFSAKKSCVGRRYVYLLPVFALDCSAHRDRGS
VLASLGSGNELVRCFECSERGRKVFGATAVQSGISSNTWNVVFKLDDIRGNLTGLDNGNG
CKEGECSERGQEAVGAMDAQSGISSNTWSAVTGVGNGEDGNIVKENVYCYGDKERQRFNK
ILKQYEGTHNFHNFTTKMKATDPAANRNIISFNADTTITIDGIEFVKCEVVGQSFMLHQI
RKMIGVAVAVMRNCALESLIETALRPDVKINVPTAPEVGLYLEECFFSSYNEICKDTHEE
VSMKDYAEEAEEFKLKHIYPHIASTEHKEGTVAVWLHSLNYRNYPDLCPEENRGANEVSG
TQTEETTRLLSHNYEKPSHISSSCFIRHPSHYYEKPTVHWIDLEHLATAMKNRLNRVLPY
IHELRVRYGGVTDNAVTDTIISDVNMMVDTAMSVTYNRLRFILQSHASTVFVAQMNPKSP
LSNKFKFPAFISSVLGSIGPLRIMNGLQDALVVYATSPDRSKTCGRAQHFEFISGHFFRL
IDNLEAIGVPLAPIDVKGGNRAGSFYPTILLDRVNGWLEFTATCHYSNYKHRDIDSAWLT
INDDPALRAFPDCSLRIECCTNPDVVNAVIASRPEGVPDDVDGATAPARPVGLIFNVNEF
GVRPAVAAEGGNPAIPAAVYIVGRGSKRYFCTSLARGLTEDEMTSRLREYIMRYDSVCTI
TSKGF
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcaaacccatgtatcaccaccaccaccacttcttccgccgccgccgccacca
tcaaccaccgccgattcctcctcctccgaccacaatgccaccatctccactgataaaaac
cctcgacacaaacgaaaaaaagtcgcaatcctcttcgcatactgcggcgcaggttatcta
ggcatgcaaaagaacccagaagccaaaacaatcgaaggagaactccaacaagccctctgc
atctccggcgctattcctaaacccgaccttcactgccccaaaatattcgactttgcccga
tctgcccgaacagacaagggcgttagtgccgttggtcaagtggtttctgggaagttctat
atggacccacctgggtttgttgagaggattaacaataacttgccggataagtttagggtt
tatgggtttaagcatgtgacggcgtcgtttagtgccaagaagtcttgtgttggaaggagg
tatgtttatttgttaccggtttttgcacttgattgttcggctcatcgtgatagagggagt
gtgttggctagtttgggctcggggaatgagcttgttaggtgttttgagtgctcggaaaga
ggtagaaaagtgttcggtgcaacagctgttcagtcgggcatttcgtcgaacacttggaat
gtggtatttaaactagacgatatacgggggaatttgacgggtttagataatgggaatggt
tgtaaagaaggtgagtgctccgagagaggccaggaagcggttggggcaatggatgctcag
tcgggcatttcgtcgaacacctggagtgcggtaactggtgttggcaatggggaagatggc
aacattgtgaaggagaatgtgtattgttatggtgataaagagaggcagaggtttaacaag
atacttaagcagtatgaagggactcacaattttcataattttactacgaaaatgaaggcg
acggacccggctgctaatcggaacattatctcgtttaatgctgacacgactattacgata
gatgggatagagtttgtgaaatgtgaagttgttgggcagagctttatgcttcaccagata
agaaagatgattggtgttgcggttgctgttatgaggaattgtgctctggaatcgttgatt
gaaactgctctacgaccggatgttaaaatcaatgtgccgacagctcccgaagtcggttta
tatttagaagagtgctttttctcatcatataacgagatatgtaaagatacccacgaagaa
gtatcgatgaaagattatgcagaagaagctgaggaattcaaattaaaacatatctatcct
cacattgcttcaaccgagcataaagaaggaaccgttgctgtttggctgcattctttaaat
taccgaaattatccagatttatgccctgaggagaaccgtggagcaaatgaagtgtcggga
actcaaaccgaagagacaaccaggctcctttcacacaattatgaaaagccgagccacatt
tcatcaagctgtttcatcaggcacccttcacactattatgaaaagccgactgttcactgg
atcgatttagagcatcttgctaccgctatgaagaatcgtctaaacagggttttaccttat
attcatgaactccgtgttcggtacggtggtgtgaccgacaacgcggttactgataccata
atttctgatgttaacatgatggtcgacaccgcaatgtcggttacttacaacagactgcgt
tttatcctccagagtcatgcatctaccgtttttgttgctcagatgaaccccaaatcgcct
cttagcaacaagtttaagtttcccgcctttatctcgtctgtacttggtagcattgggccc
ctacggataatgaacggtcttcaagacgcgctggtcgtgtatgccacgtcaccagacagg
agtaaaacgtgtggacgcgctcaacattttgaattcataagcggtcacttctttcgcctc
atcgataatctagaagcgatcggtgtacctcttgcaccaatcgacgtgaagggaggcaat
cgtgcggggtcgttttaccccaccatcctcctggaccgcgtaaacggttggctggagttt
accgccacgtgtcattactctaactacaagcatcgggatatcgatagcgcttggctcact
ataaacgacgatcctgccctccgggcttttccggattgtagtttgcggatcgagtgttgc
accaatcccgacgtcgtgaatgctgttattgcatcacggcccgagggtgttcctgatgat
gtggacggagctacggctcctgctcggccggttggtttgatttttaatgtgaacgagttc
ggggttcgaccggcagttgcagccgagggtgggaacccggcgattccagctgcggtttac
atagttggccgaggcagtaaacgctatttttgcacctcacttgctcgaggcctgacggaa
gatgaaatgacttcgaggctgcgggaatatatcatgagatatgactcagtgtgtacaatt
acaagtaaaggtttttag
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