Helianthus annuus (common sunflower): 110908090
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Entry
110908090 CDS
T05101
Name
(RefSeq) protein GAMETOPHYTE DEFECTIVE 1 isoform X1
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110908090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
han03009
]
110908090
03016 Transfer RNA biogenesis [BR:
han03016
]
110908090
03029 Mitochondrial biogenesis [BR:
han03029
]
110908090
Enzymes [BR:
han01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
110908090
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
110908090
Transfer RNA biogenesis [BR:
han03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
110908090
Mitochondrial biogenesis [BR:
han03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
110908090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_P_p30
Motif
Other DBs
NCBI-GeneID:
110908090
NCBI-ProteinID:
XP_022008687
LinkDB
All DBs
Position
1:complement(66075717..66081435)
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AA seq
636 aa
AA seq
DB search
MAFFDLNIPYTESPNQTSTNNKSTRLKLAVKAMELGYTGVAYNRTITGVMSKDDHCSIFL
FPLSSVLKLSPSISSAVNLHRRLLNVPTTAPFRQYTRLTFVVDSEAKGSCLNSGNPVIKS
YDIVAVRPLSQDVFDKACKSYEVDIIAIDFSANRFQLRQPLIKAAIERGVYFEITYSGLL
VDAPLRRQIISNAKLLVDWTRGKNVIFSSAAASVTEFRGPYDVANLACLLGFSMERAKAS
LSKTCRSLLENSLRKKKFYKEAIRVELISSTEDDSMDDWLKWDPISSDEGDLQLDDIAKS
FAASNKEPKTVKAIDFVSVINELPSHGLQIHDMVTETKSDSKFHDPRKKDDLLKSGNCDV
SPVNGNLETLAGVETSETCAMIIEEPEQQNLSLKVYDDTHEENVIDEKEGENMCSDDPNS
GILIPIDDNPSNLQCEEANNLSLNACLVPPMTESNEAGLPEEVLEQHMIDTKDVAVIPVS
SCLASSGVSLNEDLPEEQMSDAKDVAVTPVSSCLAISGVSLGQDILEEHMSVIGENVSTA
PISELATLRPLDEMQINGCDSVVHEPLDDLPMEVNVEVKDDSHMNHFSAQESSSGRVRRK
HGGSGRSMSFPFRRWLKPSHSKKTLKERRNSTIRKL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttttcgatctcaacatcccctacaccgaatcaccaaaccaaacctctactaac
aacaaatccacacgcttaaaactcgccgtaaaagcaatggaactcggttacaccggcgtc
gcctacaaccgcaccatcaccggagtaatgtcaaaagacgaccattgttcaatcttctta
ttcccgctctcctccgtcctcaaactctctccgtccatctcctccgctgtcaacctccac
cgccgcctcctcaatgttccaaccaccgctccgttccgtcagtacactcgcctcacgttt
gtcgttgattcagaggcgaaaggttcgtgtttgaattccggtaatccggtgattaaaagt
tatgacattgttgctgttaggcctttgagtcaggacgtgtttgataaagcttgtaagagt
tatgaggttgatataattgctattgatttctcggcgaatcggtttcagttgaggcagcca
ttaattaaagctgctattgagagaggtgtgtattttgaaattacatactctggtctgctt
gtggatgctccattgaggaggcagataatatccaatgccaagcttttggtggattggaca
agaggaaaaaacgttatattttctagcgccgctgcttccgtaactgaatttagaggacca
tatgatgttgcaaatctagcatgcttacttggtttctctatggaacgtgctaaagcatct
ctgtcaaaaacatgtagatctttattagagaattctttacggaagaagaagttctacaaa
gaagccattagggttgagttaatctcatcgacagaggatgatagtatggatgactggctt
aagtgggaccccatatccagtgacgaaggtgatttacaactagacgacatcgcaaaatca
tttgcggcgtccaacaaagaaccgaaaacggtcaaagcaattgactttgtttcagttatt
aatgaattgccatcacatggattgcaaatccacgacatggtaaccgaaacaaaatcggat
tctaagtttcatgatcctcgcaaaaaagacgatttattaaaatctgggaactgtgatgtc
tcaccagtgaatggaaatcttgaaactttggctggtgttgaaacaagtgaaacttgtgcg
atgattatagaagaacctgagcagcagaatctgtcattaaaagtttatgacgatacacat
gaagaaaatgttattgatgaaaaagaaggtgaaaatatgtgtagtgatgatccaaattca
ggaattttgatcccgattgatgataatccttctaatctccagtgtgaagaagcgaataac
ctttctctcaatgcctgtttagttccaccaatgactgaatcgaatgaagcaggtttacct
gaagaggttctagaacaacacatgattgatacaaaagatgttgcagttatacctgtcagc
tcatgtttggcctcttctggtgtatctttgaatgaagatcttccagaagaacagatgagt
gatgcaaaagatgttgcggttacacctgttagctcatgtttggccatttctggcgtatct
ttgggtcaagatatactagaagaacacatgagcgtaataggggaaaatgtttcaactgca
cctatcagtgaattagccactttgagacctcttgatgagatgcaaatcaatggttgtgat
tcagttgttcatgagccattggatgatttgccaatggaagtcaacgtagaggtcaaagat
gatagtcatatgaatcatttctctgcacaggagtcttcatcaggtagagttagaagaaag
catggaggttcagggcgatcgatgtcatttccttttagaaggtggttaaaaccttcacat
tctaagaaaactctaaaggagagaagaaatagcacaataagaaaactctaa
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