Helianthus annuus (common sunflower): 110908362
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Entry
110908362 CDS
T05101
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
han00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
110908362
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
han04040
]
110908362
Ion channels [BR:
han04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110908362
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Cupin_3
Motif
Other DBs
NCBI-GeneID:
110908362
NCBI-ProteinID:
XP_022008990
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Position
14:44888996..44894725
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AA seq
733 aa
AA seq
DB search
MMDEVVKDDVPMLSATNWPSDRHDYKPNRKFSNTNRSVSISIPVPSVEMSSGSTNRIGFT
SPVQTEKTMLEETVEQENIKQNKRQEGGNYHGTKNEHLLRSGQLGMCNDPFCTTCPSTYY
YKGRIISRIPKGVDRHAGAYGGAKGWVREKLSLIKHFMSGVMNPHAKVVQQWNQFVVITC
LFAIFLDPLFFYVLSVKKEHKCIVFNWELTKTIVVFRSLTDLIYLIHMLVQFRLAFISPE
SRVVGAGDLVDDPRKIALHYLSGYFFVDLFIVLPLPQIIVLLILPNSVAISGANYAKNLL
RSAILVQYIPRLFRFLPLLAGQSPTNFIFESAWANFVINLLTFVLAGHVVGSCWYLFGLQ
RVNQCLRDACHNSEFRNCKELIDCGHGVDLGSTQSNWKQNVNASACFEEDGFPYGIYVKA
VNLTAENSIITRYIYSFFWGFQQISTLAGNQTPSYFVWEVLFTMAIIGLGLLLFALLIGN
MQNFLQGLGRRRLEMSLRRRDVEQWMSHRHLPEGLRKKVRDSERYHWAATQGVNEEVLME
NLPEDLQRDIRRHLFKFVKKVRIFASMDEPILDAICERLRQKTYIKEGTTLYEGGFVTKM
VFIVRGKMESTGEDGNAVTLSEGDVCGEELLAWCLEPSSLNGDARTRGKPGYKLVCKRTV
KCLSNVEAFVLRAADLEEVTTLFAGFLRNHRVQMAIRHESPYWKGLAATTIQVAWRYRKK
RLHSGTTLPSKYK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaggttgtaaaagatgatgtaccaatgttatcagctacaaattggccatcc
gatagacacgattataaaccaaatcggaaattctcaaacacgaacagaagtgtttcaata
tccattccagtgccctccgttgaaatgagttctggttcaacaaatcgcattggctttacc
agtcccgtgcagactgagaaaacaatgttagaagagactgtagaacaagaaaacattaaa
cagaataaaagacaagagggaggtaattatcatggaacaaaaaacgaacacttgttgagg
tctggacagttgggaatgtgcaatgatcctttctgtaccacatgcccatctacttactat
tacaagggacgcatcatctcaagaattcccaagggcgttgatcgtcatgctggtgcatat
ggaggtgcaaaagggtgggtacgagaaaagttatccttgataaaacattttatgtctggg
gtcatgaatccgcatgccaaagttgttcagcagtggaatcaatttgttgtcattacttgt
ttattcgccattttcttagaccccctattcttttatgtgctgtcagtgaagaaggagcat
aagtgcatcgttttcaactgggaactgacaaaaaccattgtagttttccgaagcttgacg
gacttgatttacctcattcacatgctagttcagttcaggttagcattcatttctcctgaa
tcaagagtcgtaggtgctggagatttggttgatgatcctaggaaaattgccttacattat
ctttctggatattttttcgtcgacttatttatcgttttaccacttcctcagatcattgta
ttattaatcctaccgaattccgttgcaatatctggagctaattatgcaaagaatcttttg
cgatcagctattcttgtccaatacattcccagattattccgatttctgcctcttcttgcg
ggacagtctccaactaacttcatattcgagtccgcatgggcaaactttgtcatcaatctt
ttgacttttgttttggctggtcatgttgtgggatcatgctggtatctctttgggttacag
agggtgaatcaatgccttcgagatgcttgtcacaactctgaatttcggaattgcaaggag
ttaatagattgtggtcatggagttgacttggggagcacacagtccaactggaaacaaaat
gtaaatgcgagtgcttgttttgaagaagatgggttcccctatggaatttacgtgaaagct
gtcaacctcactgcggagaatagtataatcacaagatatatctactccttcttttgggga
tttcagcaaatcagcacacttgcaggcaatcaaactccaagttattttgtttgggaagtt
ctttttaccatggctattattgggcttggtctgctactctttgcccttttgattggaaac
atgcagaactttcttcaaggtctaggacgcaggcggcttgaaatgtcacttagacgacgt
gatgttgagcagtggatgagccaccgacacttgccagaaggcctacgaaaaaaagttcga
gactcggagcgttatcattgggctgctacacaaggggttaatgaagaagtgctaatggag
aatttgcctgaagacctgcaaagagatatccgccgccacctcttcaaatttgtcaagaaa
gtccggatttttgcgtcgatggatgaaccgattttagacgcgatatgtgaaagattaagg
caaaagacatatataaaagaaggaacaaccttatatgaaggagggtttgtgacaaaaatg
gtatttattgtaagagggaaaatggagagcacaggagaagatgggaatgcggttacgtta
tctgaaggtgatgtatgtggtgaagaactcctcgcatggtgccttgaaccttcctctctt
aatggagatgcaaggacacggggaaagccaggatacaaattggtgtgcaagaggacagtg
aaatgcttatcaaatgtggaggcatttgttctacgcgctgcagatcttgaagaagtcacc
accctttttgctggattcttgaggaatcaccgcgttcaaatggcaataaggcatgaatct
ccatactggaaaggcttggcggcaaccaccattcaggtggcatggagatacaggaagaag
cggctacatagtggtactactcttccctccaaatataagtaa
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