Helianthus annuus (common sunflower): 110908440
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Entry
110908440 CDS
T05101
Name
(RefSeq) protein STABILIZED1-like
KO
K12855
pre-mRNA-processing factor 6
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110908440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110908440
Spliceosome [BR:
han03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110908440
Complex C
U5 SnRNP specific factors
110908440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_Syf1_CNRKL1_N
TPR_16
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_17
TPR_2
TPR_8
TPR_CcmH_CycH
TPR_1
TPR_9
PMC2NT
IgD_del_linker
PAP_PilO
Motif
Other DBs
NCBI-GeneID:
110908440
NCBI-ProteinID:
XP_022009070
LinkDB
All DBs
Position
6:122679692..122684022
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AA seq
940 aa
AA seq
DB search
MQAPVAPKNRLEFLNTRPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSVGAGAPAG
PSGVGRGRGNDEEEEEEAEDKGYDENQKFDEFEGNDVGLFASAEYDEEDKEADAVWDEID
KRMDSRRKDRREARLKEEIEKYRASNPKITEQFADLKRKLVTLSAAEWDSIPEIGDYSLR
NKKKRFESFVPVPDTLLEKARQEKEHVTALDPKSRAVGGTETPWAQTPDLTAVGEGRGTV
LSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKITSDAEISDIKKARLLLKSVIQTNPKHPP
GWIAAARLEEVAGKIPTARELIKRGCEECPKNEDVWIEACRLANPDEAKAVIARGVKAIP
NSVKLWMHAAKLEHDDANKSRVLRKGLENIPDSVRLWKAVVELANEDDAKLLLQRAVECC
PLHVELWLALARLEKYDAAKKVLNKAREKLPKEPAIWITAAKLEEAFGNTSMVGKIIERG
IRALQREGVEIDREAWMKEAEAAERAGSVATCNAIISNTIGIGVEDEDRKATWVADAEEC
KKRGSIETARAIYSCAIAAFKSKKSVWLKAAQLEKAHGTRESLDALLRKAVTYTPQAEVL
WLMGAKEKWLAGDVPAARHILQEAYAAIPKSEEIWLAAFKLEFENNEPERARMLLAKARE
RGGTERVWMKSAIVERELGNSSEERRLLDEGLKLFPSFFKLWLMLGQLEERLGNLPQAKE
AYELGLKQCPNSTPLWLSLANLEERMSGLSKVRAVLTMARKRNPHFPELWLAAIRAESRH
GSKKEADILMAKALQECPNSGILWAAAIEMAPRPQRKTKSSDAYKKCEHDPHVIAAIGKL
FWHDRKVDKARTWLNRAVTLAPDVGDFWALLYKFELQHGTEDQQKEVMRKCIAAEPKHGE
KWQPISKAVENSHQPVEAILKKLVVALGKEEKAAEDNKHQ
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaccagtagcacctaaaaaccgcttagaattcctcaacacacgccctccaccc
aattatgtagccggattaggtcgtggagccaccggtttcaccacccggtccgatatcggt
ccggcgcgtgcagcaccggacctcccggaccgttctgtgggagccggggcacccgcggga
ccctccggtgtcggccggggccgaggcaatgatgaggaagaggaagaagaagctgaggat
aaaggatatgatgagaatcaaaagtttgatgagtttgaagggaatgatgttggattgttc
gcttcggcggaatacgatgaggaagataaagaggctgatgctgtgtgggacgagattgat
aagcggatggattcgaggcggaaggataggcgcgaggcgcggttgaaggaggagattgag
aaatacagggcgtcgaatccgaagattacggaacagtttgctgatttgaagcggaagttg
gttacattgtcggctgcggagtgggatagtataccggagattggggattattcgttgcga
aacaagaagaagcggttcgagagttttgtgcctgtgccggatacgttactggagaaggcg
aggcaggagaaggaacatgttaccgcgttggatccgaagagtagggcggttggtgggacg
gagacgccgtgggcgcaaacaccggatttgactgcggttggggaaggtagagggacggtt
ttgtcgttgaagttggataggctgtccgattcggtttcgggtctgactgttgttgaccca
aaagggtacttgactgatttgaagagtatgaaaattactagtgatgcggagatttcggat
attaaaaaggcgagactgttgttgaagtcggtgattcaaacgaatccgaagcatccgcct
gggtggattgcggctgcgaggctggaggaagttgcggggaagattccgacagcgagggag
ttgataaaaagagggtgtgaggaatgtccgaagaacgaggatgtgtggattgaggcgtgt
cggttagcgaatccagatgaggcaaaggctgtgattgctaggggtgttaaagcgattcct
aattcggttaaactttggatgcatgctgcgaaactggaacacgatgatgctaataaaagc
cgggtgttgaggaagggtcttgaaaatattccagattctgtaaggctgtggaaagcggtt
gtggaacttgctaacgaagatgacgcgaagcttttgcttcagagagcggtggagtgttgt
ccgttgcatgtggaattgtggcttgcgttagctaggttggagaagtacgatgcagcgaaa
aaggtactgaataaggcgagagagaagcttccgaaagaacccgcgatttggatcactgca
gcaaagttggaagaggcttttggaaacacgtcgatggttgggaagattatagaaaggggt
attcgggctttacagagagaaggagtcgagattgatcgggaggcgtggatgaaggaggcc
gaagctgctgaacgggctggttcagtggcaacgtgtaatgcgattattagtaatactatc
gggattggggttgaagacgaggatcgtaaggcgacttgggttgctgacgcggaagaatgt
aagaaacggggctcgattgaaaccgctagagcgatttacagctgtgcgattgctgcgttt
aaatcgaagaagagcgtatggcttaaagcagctcaactcgagaaggctcacggcactcgt
gagtcgcttgatgctttacttcgtaaagcggttacttacacgcctcaagctgaggtctta
tggttaatgggtgcgaaagagaagtggctcgctggcgatgtgccggcagcacgacacatt
cttcaggaagcttatgctgcgattccgaagtctgaagaaatttggcttgctgcgtttaaa
cttgagtttgagaacaacgagccggaacgagcccgaatgcttcttgctaaagcacgggaa
cggggaggaaccgagagagtatggatgaagtctgctattgttgagagagaactcgggaac
agttcggaagaacggaggctccttgatgaagggttgaagttatttccgtcgtttttcaag
ctatggttaatgctcggtcagctcgaggaacgactcggtaatttaccgcaagcgaaagaa
gcgtacgagttgggtttaaagcagtgtccgaattcaactcctctttggctctctcttgct
aatctcgaggagagaatgagcgggctgagtaaagttcgggccgtgctcacaatggctaga
aaaaggaacccgcatttccctgaattatggctggctgcgatcagagccgagtcacgacac
ggttcgaaaaaagaagccgatatcttaatggcgaaggcgttacaggaatgcccgaatagt
ggtatattatgggctgctgcaatcgaaatggctccacgaccgcaaaggaaaaccaagagt
tctgatgcttacaagaaatgtgaacacgatccacatgtaatagctgcgattgggaagcta
ttttggcatgacaggaaggtggataaagcgcgcacttggcttaaccgagcggttactctt
gcacccgatgttggcgacttttgggctttgctttataagtttgaactgcagcatggaacc
gaggaccagcagaaggaagtcatgaggaagtgtattgctgcggaaccaaaacatggtgaa
aagtggcagccgatatcgaaggcggttgagaattcccatcagccggttgaagcgattttg
aagaagctagttgttgcccttggaaaggaagagaaagctgctgaggataacaaacaccag
taa
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