Helianthus annuus (common sunflower): 110908526
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Entry
110908526 CDS
T05101
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110908526
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110908526
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110908526
NCBI-ProteinID:
XP_022009175
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Position
14:complement(77538241..77542312)
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AA seq
448 aa
AA seq
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MAVCKESVIRCSFLLLISLILAVFVTVSGEKSDNLNLSAVETEQFQRLNTSSFAAREKES
EILNENAVQDPEEVVSMVEMSVKNSTERRKLGYFSCGTGNPIDDCWRCDPNWQKNRKRLA
DCGIGFGRNAIGGRDGRFYVVTDSGDDNPVNPRPGTLRHAVIQDEPLWIVFKRDMVIQLK
QELIMNSFKTIDARGVNVHIANGACITIQFITNVIIHGLHIHDCKPTGNALVRSSPSHYG
WRTMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVMLLGH
SDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSGNPTINS
QGNRYLAPNNPFAKEVTKRVDTASSQWHGWNWRSEGDLLLNGAYFTPSGAGASASYARAS
SLGAKSSSMVGTITSGAGALVCRRGRQC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtgtaaggaatcggtgattcggtgctcgtttctgctgctaatttcgttgatt
ttggcggtttttgtcaccgtttccggtgagaagagtgataatttgaatctcagtgctgtt
gaaacagagcaatttcagagattgaacacctcctcatttgcagcaagagaaaaggagtct
gaaattttgaatgaaaatgcagttcaagaccccgaggaggtggtctccatggttgaaatg
agcgtgaaaaacagcactgaaagaaggaaactgggatacttctcatgtgggaccggcaat
ccaattgatgactgctggaggtgtgacccaaactggcaaaaaaaccgtaagcgacttgca
gactgtggcattgggtttgggcgcaatgccattggcggtcgcgatggtcggttctatgtg
gtcacagattcgggagatgataatccagtcaacccgcgacccggcacactccgccacgct
gtcatccaagacgaacctctttggatcgtgttcaaacgtgacatggtgatccagttgaaa
caagaacttattatgaacagttttaaaaccatcgatgctcgtggagttaacgtccacata
gctaatggagcttgtatcaccatacagttcatcactaacgttatcatccacgggttacac
atccacgattgtaaaccgactggaaatgcgttggtaagaagctcaccgtcccattacggt
tggagaacaatggccgacggtgacgcgatttccatttttggctcgagccatatttgggtt
gaccataactctctgtctaactgtgctgatgggctcgttgatgcggtcatgggctcaacc
gcgatcaccatttccaacaattacttcacgcaccacaacgaagttatgttgttgggccat
agtgactcgtatactagggacaaacaaatgcaagtgactattgcttataaccattttgga
gaaggtcttattcaaagaatgcctagatgcagacatggatatttccatgtggtgaacaat
gactacacccactgggagatgtatgccattggtggaagtggaaaccccaccatcaacagc
caaggcaacagataccttgcccccaacaatccctttgctaaggaggtgacaaagagggta
gatacagcttcaagccaatggcatggatggaactggagatcagaaggtgatttacttctc
aacggggcttatttcaccccatctggtgcaggagcctcagcaagttatgcaagggcttca
agtttaggtgccaagtcatcttccatggttggaaccatcacttcaggcgctggcgccctc
gtttgccgtcggggccgccagtgctag
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