Helianthus annuus (common sunflower): 110908663
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Entry
110908663 CDS
T05101
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110908663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110908663
03041 Spliceosome [BR:
han03041
]
110908663
03036 Chromosome and associated proteins [BR:
han03036
]
110908663
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110908663
Spliceosome [BR:
han03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110908663
Complex B
110908663
Complex C
U2 SnRNP specific factors
110908663
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
110908663
TFTC complex
110908663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
110908663
NCBI-ProteinID:
XP_022009311
LinkDB
All DBs
Position
14:complement(92195222..92200175)
Genome browser
AA seq
1212 aa
AA seq
DB search
MYLYNLTLQQATGIVCAINGSFSGGNKSQEIVVARGKVLELLRPDENGKIQTILSVDVFG
AIRSLAHFRLTGAQKDYIVVGSDSGRIVILDYNKEKNVFDKIHQETFGKSGSRRIVPGQY
LAIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTITYSIAGVDCGFDNP
IFAAIELDYSEADQDSTGQAANEAQKVLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPG
GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSATMHKQKSMFFFLL
QTEYGDVFKVTLDHDNERVTELKIKYFDTIPVTSAMCVMKLGFLFAASEFGNHALYQFQA
IGADPDVESSSATLMETDEGFQPVFFKPRGLKNLVRIDQVESLMPIMDMKVVNLFEEETP
QIFTLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAFIVVSFANA
TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRVNEWRTPGK
RTIVKVGYNRLQVVVALSGGEIIYFEVDMTGQLMEVEKNEMSGDVACLDIAPIPEGRQRS
RFLAVGSYDNTIRILSLDPEDCMQVLSLQSVSSPPESLLFLEVQASSGGEDGADHPASLF
LNAGLQSGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSILVRGRRAMLCLSSRPWLGYV
HQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETAIPLRYT
PRKFVFHPKKKLLVTIESDQGAFPAELRESAKKECFEAAGQGENGKMEIENGGDDEDKDD
PLSDEQYGYPKAESDKWVSCIRVLDPKSTETTCLLELQDNEAAFSICTVNFHDKEYGTLL
AVGTAKGLQFWPKRSLTAGYIHIYRFVKDGKSLELLHKTQVDGVPLALCQFQGRLLAGIG
SILRLYDLGKRRLLRKCENKLFPNTINSIHTYRDRIYVGDIQESFHYCKYRRDENQLYVF
ADDSVPRWLTSAYHVDFDTMAGADKFGNIYFVRLPQDVSDEIEDDPTGGKIKWEQGKLNG
APNKVEEIVQFHVGDVVTCMQKASLIPGGTECVMYGTVMGSLGALLAFTSRDDVDFFSHL
EMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPTLPLDIQRKIADELDRTPAEI
LKKLEEVRNKIV
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacaatctcaccctgcaacaagccaccggcatcgtctgcgccatcaacggc
agcttctccggcggcaacaaatcccaagaaatcgtcgtcgcacgcggcaaagtcctcgag
ctcctccgccccgacgaaaacggtaagatccaaaccatactctccgttgatgttttcggt
gccattagatctctagctcactttaggttaaccggtgctcaaaaggactatatcgttgtc
ggttccgattccggccgtattgttattctagactacaataaggagaagaatgtgtttgat
aaaattcaccaggagacgttcggtaagtccggtagccggaggatagttcccggtcagtat
ttagctatcgatccaaaaggtcgtgcggttatgattggtgcctgtgagaaacagaagttg
gtttatgtgttgaatagggatacggctgctaggttaacgatttcgtcgccgttagaggcg
cataagtcgcatacaataacgtactcgattgctggggtggactgtgggtttgataatccg
atatttgcggcgattgagttggattattcggaggcggatcaggattcgactgggcaggct
gcgaatgaggcgcagaaggtgttgacgttttatgagttggatttggggttgaatcatgtg
tcgaggaagtggtcggagcaggtggataatggggcgaatatgttggtgacggttcctggt
ggtggggatggaccgagtggggtgcttgtttgtgcggagaattttgttatttataagaat
caggggcatccggatgttcgtgctgtgattcctagacgagcggatttgccggctgaacgt
ggggtgcttattgtttcggcgactatgcataagcagaaatctatgtttttctttcttctg
cagactgaatatggggatgtgttcaaagttacacttgatcatgataacgagcgtgttacg
gagctgaaaattaagtattttgataccataccagtgacatctgccatgtgtgtcatgaaa
ttaggttttctgtttgctgcttctgagtttgggaatcatgcgttgtatcagtttcaagct
ataggtgctgatcctgatgtagagtcatcatcagctacgttaatggaaaccgatgaagga
ttccagccggtattttttaagcctagagggttgaaaaatcttgttagaattgaccaagtg
gagagcctgatgcccattatggatatgaaagttgtaaatcttttcgaagaagaaacccct
caaatattcacactttgtggccgaggccctcgttcttctcttagaattttacgacccgga
cttgccatcagtgaaatggctgtttcacagcttcctggggttcccagtgcggtttggaca
gttaaaaagaacgttaacgatgagttcgatgcttttatcgtcgtttcttttgcgaatgcg
actcttgttctctctattggagaaactgtagaagaagttagcgacagtggatttctcgac
accacaccttcacttgctgtttcattaataggtgatgattcgttaatgcaagtacatcct
agtggtattagacacatcagggaagacgggcgtgttaacgagtggagaactcccggaaaa
cgaactatcgtgaaggtcggatataatcgacttcaggtggtggttgcgttgagtggaggg
gagattatatacttcgaggtggatatgaccggacagttgatggaagttgagaagaacgaa
atgtctggtgacgtggcgtgtttggatatcgctccgatacccgaaggaaggcagagatct
cgttttctagctgtgggatcgtacgataataccatccggatattgtccttagatcccgag
gactgtatgcaggttcttagcctgcaaagtgtttcttcacctcctgagtcacttctgttt
ctcgaggttcaggcttcttcaggtggtgaagatggtgcggaccatccggctagcctgttt
ctgaacgcgggtcttcaaagtggggttctgtttaggaccgttgtggacatggtcacgggc
cagctttcggatgcacggtctcggtttctcggactccgtgctcctaaactgttctcgatt
ctggtgagaggaagacgagctatgctttgcttgtcgagtagaccgtggttaggttacgtt
caccagggtcattttcttttgacgccgctttcatacgaaacactcgaatacgcagcctcg
ttttcatctgatcagtgtgctgaaggtgtggtagcggttgctggggatgcgttaagagtt
ttcacaatcgaaagattaggcgagacatttaatgaaactgctataccgttgaggtatact
ccaagaaagtttgtgttccatccgaaaaagaaacttctggtaacgatcgagagtgatcag
ggtgcttttcctgctgaattacgtgaaagtgctaaaaaggaatgttttgaggctgcgggt
cagggagaaaacgggaaaatggaaatagaaaatggcggtgatgatgaagacaaagatgac
ccgttatctgatgaacaatacgggtatccgaaagctgaatcggataagtgggtttcttgt
attcgggttcttgaccctaagtcaaccgagacaacatgtcttctagagcttcaagacaac
gaggctgcgttcagtatatgcactgtgaatttccacgataaagagtacggtaccctttta
gctgtgggtacagcaaagggtcttcagttttggcccaaaagatctttgacagctggatat
attcatatttaccggttcgtaaaagatggaaaatcgcttgaacttctgcacaaaacccaa
gttgacggtgttccgcttgcgttatgccagtttcagggacgactgcttgctggaatcggg
tcaattcttcggctttatgatttgggtaaaagacgactgcttagaaagtgtgagaataag
ctgttcccgaatacaatcaactccattcatacgtaccgtgatcgaatttatgtcggagac
attcaagagtcgtttcactactgcaagtacagacgcgatgaaaaccagctatacgtattt
gctgacgactctgttccaagatggctgacatcagcataccacgtagacttcgacacaatg
gcaggtgccgacaagttcggaaacatttactttgtgcggctgccacaggacgtatcggat
gaaatcgaagatgatccaactggcgggaagattaagtgggagcaggggaagcttaacgga
gcaccaaacaaggttgaagagattgtgcaatttcacgttggtgatgtggtgacgtgtatg
cagaaagcgtctttaattccaggtggtaccgagtgtgtgatgtatggaacggtgatgggc
agtttaggggcgttgttggcgtttacgtcacgtgatgacgtggacttcttttctcacttg
gagatgcacatgcgacaggaacatccacctttgtgtggaagagaccacatggcgtataga
tccgcttattttcctgttaaggatgtgattgacggggatctttgtgaacaatacccgaca
ttgccgctagacatacagcggaaaattgcagatgaattggatagaactccagcagaaatt
cttaagaaactggaagaagttagaaacaaaattgtttaa
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