Helianthus annuus (common sunflower): 110908700
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Entry
110908700 CDS
T05101
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110908700
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
han01009
]
110908700
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110908700
03036 Chromosome and associated proteins [BR:
han03036
]
110908700
Protein phosphatases and associated proteins [BR:
han01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110908700
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110908700
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110908700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Me-amine-dh_H
Motif
Other DBs
NCBI-GeneID:
110908700
NCBI-ProteinID:
XP_022009373
LinkDB
All DBs
Position
2:complement(3257895..3272226)
Genome browser
AA seq
514 aa
AA seq
DB search
MNGGDGGDVAAAPDGPPPPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDR
GGRVVLFERTDKKEHGGNRRDLEKTDYSSSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIRWCQTANGALFLLSTNDKTIKYWKVQEKKIKKVADVSMEPSKLTGNGNVASSSVTSA
PKPHLANGGYSDKSYTSINNDLLFPPGGIPSLRLPVVVTSNETNLVARCRRVYAHAHDYH
INSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHC
HTLAYSSSKGSIRLIDLRQSALCDKHSKLFDEQEAPGSRSFFTEIIASISDIKFARDGRY
ILSRDYMTLKLWDINMDSGPVSTFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGLRVAT
GSYSNLFRVFGCHPASTEATTLEASKNPMRRQVQAPSRPARSLSSITRAVRRGGEVDANG
NSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggcgatggcggagatgttgcggcagctcccgacggtcctccaccgcctctt
gactggaaattctctcaggtgtttggtgaacgtaccgccggtgaagaagtgcaggaagtt
gatatcatatccgcaattgaattcgataaaagtggtgatcatcttgctaccggtgatcgt
gggggcagagtagtattatttgagaggactgataaaaaggagcatggtgggaatagaagg
gatttagagaagactgattattcaagtagtaggcatccagaatttcgctacaaaactgag
tttcagagccatgaacctgagtttgattatttaaagagtttggagattgaggagaaaatt
aacaaaatcagatggtgccaaacagccaatggtgccctctttcttctgtctacgaatgat
aaaaccattaaatactggaaggtccaagagaagaagattaaaaaagttgctgacgtcagc
atggagccatctaaactaactggaaatggcaatgttgctagttccagtgttacttccgcc
cctaaaccacatcttgcgaatggcggatactctgacaaatcctacactagtataaacaat
gacttactatttcctccagggggcattccgtcacttcgtttacccgtggtagtaactagc
aacgaaacaaaccttgttgcaagatgtagaagagtatatgctcatgcacatgactatcat
atcaattccatctcgaataacagtgatggcgaaacgtttatatctgctgatgatcttcgg
ataaacctttggaatttggaaattagcaaccaaagtttcaacattgtggatgtcaagcct
gcaaacatggaagacctaactgaggtgattacatcagcagagtttcatcctactcattgt
catacgctagcatatagtagttcaaaaggatccattcgccttattgacttgcgccagtct
gccttgtgtgataagcattctaaattgtttgacgaacaggaagctcctggttcaagatca
ttcttcactgagataatagcctctatttcagatattaagtttgcgagagatggaagatat
atactaagtcgtgattatatgacccttaagttatgggacattaacatggactccggtcca
gtctcgacatttcaggtgcatgaacatttaagacccaagctgtgtgatttatatgaaaat
gattctattttcgacaaatttgagtgctgtttgagtggtgatggcctacgtgttgcaact
ggttcttacagcaacttgttccgtgtgtttggctgccatccggccagtactgaagcaact
accctagaagctagcaagaacccaatgaggaggcaagtgcaggccccctcaagacctgcc
agatccctaagcagcataacccgtgcagttagacgaggtggagaggttgacgccaatggg
aattcatttgatttcacaacaaaattactccatctcgcatggcatcctactgaaaactca
attgcttgtgctgctgcaaacagcttgtacatgtattatgcatga
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