Helianthus annuus (common sunflower): 110908826
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Entry
110908826 CDS
T05101
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03082
ATP-dependent chromatin remodeling
han03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110908826
03083 Polycomb repressive complex
110908826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
han03036
]
110908826
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110908826
Histone modification proteins
HAT complexes
HATB complex
110908826
HDAC complexes
Sin3A-HDAC complex
110908826
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110908826
PRC2.2
110908826
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110908826
Heterochromatin formation proteins
Other heterochromatin formation proteins
110908826
Chromatin remodeling factors
NuRD complex
110908826
NuRF complex
110908826
NuRF complex (fruit fly)
110908826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
eIF2A
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_SPT8
BBS2_Mid
Motif
Other DBs
NCBI-GeneID:
110908826
NCBI-ProteinID:
XP_022009508
LinkDB
All DBs
Position
2:4271050..4279480
Genome browser
AA seq
456 aa
AA seq
DB search
MKERGATGNGGGVRRSTVDNRYSQWKHLVPILYDWFANHNLIWPSLSCRWGPQLEQATYK
NRQRLYLSEQTDGSVPNTLVIANCEIVKPRVAAAEHISQFNEEARSPYVKKFKTIIHPGE
VNRIRELPQNSNIVATHTDSPDVLIWDVESQPNRQAVLGATASRPDLILTGHQENAEFAL
ATCRSEPLILSGGKDKSVVFWNIHDHISTLATQPKTDGPGDKPSESPIVQARGVFHGHTD
TVEDVQFCPSSAQEFCSVGDDSCLILWDARTGSSPVVKVEKAHNADLHCVDWNPSDENLL
LTGSADNTIRMFDRRNLTANGIGSPIHIFENHKAAVLCVQWSPDKSSVFGSSAEDGVLNI
WDHNKIGELSGPSTKPAQGLLFRHSGHRDKVVDFHWNAHDPWTIVSVSDDNESTGGGGTL
QIWRMIDLIYRPQEEVITELDKFKSHILTCSSEQNS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagaggtgctaccggcaacggcggaggagtacggcggtcgaccgtcgataac
cgctattcacagtggaagcatctcgttccgattctctacgactggttcgctaaccacaac
cttatttggccctctctatcctgccgatggggaccacagttggagcaagctacttacaag
aaccgccaacgactctacctatcagaacagactgatggtagcgtaccaaacacacttgtg
atagcaaattgtgaaatcgttaaacctagggttgcagcagcagaacacatatcacagttc
aatgaagaagcacgatcgccctatgtaaagaagttcaaaactataatacatcctggagag
gtgaatcgcatcagggagcttcctcagaacagcaatatagtagctacacacactgatagt
cctgatgtcctgatctgggatgttgaatctcaacctaatcgccaggctgtcttgggagcc
acagcgtctcgtcctgatttgattttgaccggtcatcaagaaaatgccgagtttgctctt
gccacgtgccgaagtgaaccccttatactttctggaggcaaggacaaatcagttgtcttt
tggaatattcatgatcatatatctacattagcaacacaaccaaagaccgatgggcctggt
gataagccttctgagagccctattgttcaagcaagaggcgtgtttcatggacatactgat
actgttgaagatgtacaattttgcccctcaagtgcacaagaattctgtagtgttggtgat
gattcttgtcttattctgtgggatgcaagaacaggttcttctccagttgtcaaggttgag
aaagcgcacaatgctgatcttcactgtgttgattggaatccgagcgatgaaaatctttta
ctaacagggtctgctgataacactattcgcatgtttgatcgtcggaatctcactgcaaat
gggattggatcacccatccacatatttgagaatcacaaggccgctgttctttgtgtacag
tggtctccagacaaatcatccgtctttggcagttcggcagaagatggagtcttgaacatc
tgggatcataataagattggggaactttctggtccatccacaaaaccggcacaaggctta
ttgttccgtcattctgggcacagggacaaggtggttgattttcactggaacgcacatgat
ccatggacaatcgttagtgtatctgacgacaatgaaagtactggtggcggtggtacctta
cagatatggcggatgattgatttaatttatcgcccacaagaggaggttataaccgagctg
gataagttcaaatctcacattctcacttgctcctcagaacagaactcttag
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