KEGG   Helianthus annuus (common sunflower): 110908995
Entry
110908995         CDS       T05101                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110908995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110908995
   03036 Chromosome and associated proteins [BR:han03036]
    110908995
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     110908995
Chromosome and associated proteins [BR:han03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     110908995
    COMPASS/SET1 complex (yeast)
     110908995
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40 EIF3I Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214 Beta-prop_SCAP Cytochrom_D1 Beta-prop_VPS8 KNTC1_N Beta-prop_DCAF4 VPS11_N Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N DUF5812
Other DBs
NCBI-GeneID: 110908995
NCBI-ProteinID: XP_022009691
LinkDB
Position
14:111036254..111040357
AA seq 332 aa
MAGGQTDGEDKVSLELTEEIIQSMEVGMAFRDYTGRISSMDFHKTSNFLVTASDDESIRL
YDVANATCLKTINSKKYGIDLVSFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFRGH
HDRVVSLSLCARAEHFISGSLDRTVLLWDQRADKCQGLLRVQGRPATAYDDQGLIFAVAF
GGSIRMFDSRNYEKGPFEIFSVGGDVSDANVVKFSNDGRLMLLTTKDGHVHVLDSFRGTL
LGTYNVKPVSSNSTLEASFSPEGMFVISGSGDGSVYAWNIRSGKEVGSWLSNENETPVIK
WAPGSLMFVTGSSELSFWIPDLSKLAAYVGRK
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcaggtggacaaacggatggagaagacaaggtgtcactggagcttacagaagaaatt
attcagagcatggaagtaggcatggcgtttcgtgattatactggtaggataagttcaatg
gattttcacaagacttcaaattttttggtgactgctagtgatgatgaatccattcggctc
tatgatgtggctaatgcaacatgtttgaagacaattaatagcaaaaagtatgggattgac
ttggtgtccttcacttcacatcccacaactgttatatactcctctaaaaatggatgggac
gaatctctgcggcttctctcattgcatgacaacaaatacttgcgctactttagaggtcat
catgacagggttgtctcccttagtttgtgtgcacgagcagaacattttatctctggctct
cttgatagaactgttctgctttgggatcaaagagcggataaatgtcagggacttttacgt
gtacaaggaagaccggcaacagcttatgatgatcaagggcttatctttgcagttgcgttt
ggaggatcgataaggatgtttgattcacgtaattatgaaaagggtccttttgaaatattt
tccgttggtggagatgtgtcggatgcaaatgttgtcaaattcagtaatgatggtagactt
atgttgttgacaactaaggatgggcatgttcatgtacttgattcctttcgtggtacactt
cttggcacatataatgtaaagccagtttcgagtaattcgactttggaggcctcttttagt
cccgaaggaatgtttgttatatcaggttcaggtgatggtagcgtttatgcttggaacatt
cgtagtggcaaagaagtgggtagttggttgagcaatgaaaacgaaacccctgtcataaaa
tgggctccaggcagtctcatgtttgttaccggttcttctgaattgtcgttttggatcccg
gatttgtctaaactggcagcatatgttggaagaaagtag

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