Helianthus annuus (common sunflower): 110909054
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Entry
110909054 CDS
T05101
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110909054
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
han01009
]
110909054
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110909054
Protein phosphatases and associated proteins [BR:
han01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110909054
Spliceosome [BR:
han03041
]
Common components
Common spliceosomal components
SR proteins
110909054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110909054
NCBI-ProteinID:
XP_022009760
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All DBs
Position
14:complement(112819462..112822789)
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AA seq
249 aa
AA seq
DB search
MADSPRRRYSQSPPYEAPPSRSRSRSRSRSRSWSRPRGRPASRSRSRSRGREEEIENPGN
TLYVTGLSTRVTQEQLQDHFSKEGKVANCFLVVEPRSRISRGFAFITMETVEDANRCIKH
LNQSVLEHRQITVERSRRKRPRTPTPGHYLGLKNARDTGYRGDRGGRYRGRDDYGYRRSP
PRRSPPPYRGGGGGRDYSPPPRRSPPPYRGGGGRDYSPPRRSPYYGGRSRRERTRSPPYR
SPERHYGRR
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcacctcgacgaaggtactcacaatctccaccctatgaagcaccaccatca
aggtctcggtccaggtcacgctctagatcaagatcatggtcaaggcctagaggtagacct
gcatctaggtcaagatccagaagccgtggacgggaagaggagattgaaaatcctggaaat
accctttatgtaactggcctatctacacgcgtcactcaagagcagcttcaagatcatttt
tcaaaagagggaaaggtcgccaactgctttctggttgtggagcctcgttcacgcatctct
cgtgggtttgcttttataacaatggaaactgttgaagatgccaaccgctgcataaagcat
cttaatcagtcggttctggagcatcgtcaaataactgttgagaggtcacgaaggaaacgc
cctaggacacctacacctggtcattacctaggactgaaaaacgctagggacaccgggtat
cgtggtgacagaggcggcaggtatcgtggacgtgatgactatggataccgtaggtctccg
ccaaggaggtccccgccaccatatagaggtggtggtggtggtcgtgattactctcctcct
ccaaggaggtctcctccaccgtatagaggtggtggcgggcgtgattactcaccacctagg
cgctcgccttattatggtggcagatcaaggagggagcgaacaaggtctcctccatacagg
agtcctgaaaggcactatggtcgtcgctag
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integrated database retrieval system
