Helianthus annuus (common sunflower): 110909269
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Entry
110909269 CDS
T05101
Name
(RefSeq) DNA repair protein RAD4 isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
110909269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
han03400
]
110909269
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
110909269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
110909269
NCBI-ProteinID:
XP_022009994
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All DBs
Position
14:complement(123196670..123204746)
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AA seq
907 aa
AA seq
DB search
MKTRNQAKRKNQSTGEEGVPAHDPKANGTLANTSQDGVNKFLKQAGSRRSRGSKKQDNHP
LSWDDADKLKGKEKQVNDDSYAQNMSEVKDSKNSSPSNKNDGSPQQAKSELEDVMADSDW
EDGSNPNLNSENNHPGYINKDITIEFDSSPGAVKRKPIRRASAEEKEVAELVHRTHLLCL
IGRGRLIDSACDDPLIQASLLSLLPANMLKLSEATNLTVDALTPLVNWFHSNFRVRISSN
ERSFPLALATALETHEGTPEEVAALSVALFRALNFSTRFVSILDAASLKPDADRCDDMSQ
GRKLGKGVFDSSTIMVTQSNEASTSSDKHTAPVGVDQKIASEASTKASSQRKSKKSGQSQ
SQIVSRDTDSTVVDQSNEKTMDPSSTGVKRKGDIEFEMQMEMALAATAAQTLERNLDNDV
KSSNISSSSLSPFKRLKKIKFEESQDISTAVGSRKIGAPLYWAEVYCGGENSTGKWVHVD
AVNAIVDGEHKVEAAAAACKTNLRYVVAFAGQGAKDVTRRYCAKWYKIASHRVNSTWWDA
VLRPLKELECRATEGTSGTPNNVKREERTYLEDMELETKALTEPLPTNQQAYKNHHLYAL
ERWLTKYQILHPKGPVLGFCSGHSVYPRACVQTLHTKERWMREGLQLKVNELPAKVLKRS
TKVNKGKVPEADEDDENDCAGPGGTIDLYGKWQTEPLCLPSAENGIVPKNDRGQVDVWSE
KCLPPGTVHLGFPRIFAIAKKLEIDYAPAMVGFEFRNGRSFPVYNGIVVCSEFKNIILEA
YAEEEVRRGEEERRKNEAQAISRWYQLLSSIITRQRLNNRYAEGVSSQPSNDIQKTNDAF
HQTSEDVQKPMSDEANEDVGQPDVGPQPLFEEDHEHVFLTNDPGSDVESSVRIKRCQCGF
SIEVEEL
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccagaaatcaagccaagcgaaagaatcaatcaactggtgaagagggagtacct
gcacatgacccaaaagcaaatggaactctcgctaatacatcacaggatggtgtcaacaag
tttctgaaacaagctggttcacgccgttctcgtggttccaaaaaacaagataatcaccct
cttagttgggatgatgctgataagttaaaggggaaggaaaaacaagttaatgacgacagc
tatgcacaaaatatgtcggaggtcaaggattctaagaactcatcaccttcgaacaaaaat
gacggaagtcctcagcaagctaagtctgaactggaagacgtaatggctgattcagattgg
gaagacggatcgaatcccaatttaaattctgaaaataatcatccaggttatataaacaag
gatatcactatagagttcgattcatcacccggtgcagtcaagcggaagcctatacgccga
gcttctgccgaagaaaaggaagtggctgagcttgtacacaggacacatttactctgttta
attggacggggacgattgattgatagtgcttgtgatgatcctttaattcaggcatcttta
ttgtcacttttgccggcaaacatgctgaagttatcggaagccacaaatctcacagtcgat
gctttgactcctttagtcaactggttccatagtaacttccgcgttagaatttcaagcaat
gaaagatccttcccgttagctttagccacagctctcgaaacccatgaggggactcccgag
gaggtggcggcgttatctgttgcactgtttagagcattgaatttttcaacacggtttgta
tccattttagatgccgcatccttgaagccagatgccgatagatgtgacgatatgtctcaa
ggaagaaaactcggtaagggggtattcgactcatcaacgatcatggtgactcaatcaaat
gaggcgtctacatcttccgataaacacactgcacctgttggtgttgaccagaagattgca
tctgaagcttctacaaaagcttcaagccaaaggaaaagtaaaaagtcaggtcaaagtcaa
agtcaaattgtctctcgagatacagactccaccgtagttgaccagtcaaatgagaaaacg
atggacccttcttctacgggcgtaaagagaaaaggggatattgagtttgagatgcagatg
gaaatggcacttgcggcaactgcagcacagacacttgaacgcaatctcgacaatgatgtt
aaaagttctaatattagttcttcgagtttatctccgttcaagagattgaagaagattaaa
tttgaagagtctcaggatatttctacggcggttggatcgagaaaaataggagctccgttg
tattgggcggaagtctactgtggtggagagaattcgactggaaaatgggttcatgttgat
gcggtaaatgctatcgttgatggtgaacacaaagtagaagccgcagctgctgcatgtaaa
actaacttgagatacgtcgttgcttttgctggtcaaggagctaaagacgtgactcgcagg
tattgcgcaaagtggtacaagatagcttctcatcgagttaattcgacttggtgggacgct
gtgttgcggccacttaaagagttggagtgtagagcaaccgaaggcactagcggaacgcct
aataatgtgaaaagagaagaaaggacatatcttgaggatatggagctcgagaccaaagca
ttaaccgagccacttccaactaatcaacaggcatataaaaaccatcatttatacgctctc
gaaagatggcttacaaagtaccaaattcttcacccaaagggccccgttttgggattttgt
tccggtcattctgtttacccgagggcttgtgtacaaacactgcacactaaagagagatgg
atgagggaagggctacaattaaaagtcaatgaactcccagcgaaggtgttgaagcggtca
acaaaagtcaacaaagggaaagttcccgaagccgatgaagatgacgaaaatgattgtgca
gggcccggagggactatcgatctttatggaaaatggcaaacagaacccttgtgcttgcct
tctgcggaaaacgggatcgtgccaaagaatgatcgcgggcaagtagatgtgtggtccgag
aagtgtttgcctccgggaaccgtgcacttagggtttccgagaatctttgctatcgcaaag
aagctggagatcgattacgcacctgcaatggtcgggtttgaattccgaaatggccgttcc
tttcctgtatataatggcattgtggtgtgtagtgaattcaagaatataattctagaggca
tatgcggaagaagaagtgagaaggggagaagaagagagaaggaagaacgaagctcaagcc
atatcgcggtggtatcagcttctttcatctataattactcgacaaagattaaataatcga
tacgcagagggagtttcttcacaaccgtcaaatgatattcaaaaaacgaatgatgcgttt
catcaaacaagtgaggatgtacagaaaccgatgtctgacgaagcaaatgaagatgttggt
caacctgatgttgggccgcaaccattgtttgaagaagaccatgagcatgtgtttttgacg
aatgatcctggttcggatgtagagagttccgttaggataaaacggtgtcagtgtgggttt
tcaattgaagttgaagagttgtag
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