Helianthus annuus (common sunflower): 110909901
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Entry
110909901 CDS
T05101
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
han01009
]
110909901
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110909901
Enzymes [BR:
han01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110909901
Protein phosphatases and associated proteins [BR:
han01009
]
HAD phosphatases
Fcp/Scp phosphatases
110909901
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110909901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
Motif
Other DBs
NCBI-GeneID:
110909901
NCBI-ProteinID:
XP_022010324
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All DBs
Position
15:351294..358831
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AA seq
717 aa
AA seq
DB search
MSRLGFNNKSVVYHGEACLGELDVIPTADKTFHFPNNEIRIHHFSQLSERCPPLSVLLAI
SSLPVRCKLESSSPVKQPLLDLHAACFYELKTAVVVIGDEEVHLVAMPSKLKRFPCFWCC
LVPSRLYNACLGMLNMRCLSIVFDLDETLIVANTMRSFEDRIEVLTGWIGQESDPVRVSG
MTSELKRYVEDRALLKQYAENDVVTDSGQTYNVKLEDVPVNAAGNERVQRPVIRLPEKNV
VLTRINPEIRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVFVCTMAERDYALEMWRLLDPG
AHLIGPKQLLTRVVCVKSGARKSLLNVFQDRNCHPRMAMVIDDRLKVWEEKDQPRVHVVP
AFTPYYAPQAETASAVPVLCVARNVACNVRGGFFKEFDENLIRRVSEHFHEDEVLNLPPA
PDVCNYLMSEDASFVPNGNTSAPMADGMNGPEVTQRLNQQDARNVDLKSERSQPLVPTAS
IYGPPSFRSMMPSDKPSLLGPIQGPEIASRQRAGYHPLSHGIASSFSAGIQPLISEPKND
EVFHGYGLQKKNLQQAGQPSDVGVPHNPPFLNNKRGPTDSGNSNLLQPSLSVGVLQEIGQ
RCGSKVEYRSILSSSRDWPFSYEVLFTGEKVGVGMGKTRKDAQQQAAENALRSLADKYVA
HVISQSETVKKDPDNEVENGFLWESDADESPVKDASEVAEMRRSSNSTGQLVQKSNH
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtttagggtttaataataaatctgtggtttaccatggagaagcttgtttgggt
gaattggatgttattcctaccgcggataagactttccacttcccaaacaacgagattcgt
attcatcatttctcccagctcagtgaaagatgcccccctctctcagttctcttagcaatc
tcatcgcttcccgttcgttgcaagctcgaatcatcttcacccgttaaacaaccgcttctc
gatctccacgccgcttgtttctacgaactaaagacggctgtggtggtgattggagatgaa
gaggtgcatttagtggcaatgccgagtaaattaaagcggtttccgtgtttctggtgttgt
ttggttccgtctcggttgtacaatgcttgcttagggatgttgaacatgaggtgtctttct
atcgtgtttgatcttgatgagacgcttattgttgcgaatacgatgaggtcctttgaagat
aggattgaggttttgactggttggattgggcaggagtcggatcctgttcgtgtttctggg
atgacttctgagcttaagagatatgtggaggatcgggcgttgttgaagcagtatgctgag
aatgatgtggttacggacagtgggcagacgtataatgtgaaactggaggatgttcctgtg
aatgctgctggtaatgagcgtgttcagcggcccgttataagattgccggaaaaaaatgta
gtcttaacccgtattaatccagagattcgtgataccagtgtgcttgtgagattacggcct
gcatgggaagatttaagaagctatttgattgcaaaaggacgcaaaagatttgaagttttt
gtgtgcactatggctgaaagagattatgccttggagatgtggaggttgttagaccctggg
gcccacctaattggtcccaagcaactgttgactcgtgttgtatgcgtcaaatcaggtgca
cgcaagtctttgctgaatgtcttccaagataggaattgtcatccaaggatggccatggtg
attgatgataggttaaaggtttgggaagaaaaggatcaacctcgagttcatgtggtacct
gctttcactccttattatgctccacaagcagagacggcaagcgctgttccagttctttgt
gtagcaaggaatgttgcatgcaacgttagaggtggtttcttcaaagaatttgatgagaat
cttataaggagagtttctgaacactttcatgaagatgaagttttgaatctaccacctgca
ccagatgtttgcaactatcttatgtcagaggatgctagttttgtaccaaatggtaataca
agtgccccaatggcagatggaatgaatggtcctgaagttactcaaagactgaatcagcag
gatgctagaaatgttgacctaaaatctgagagatcccagccgttagttccaactgcaagt
atctacggtccaccatctttcagatcgatgatgccttccgataaacctagcttactgggc
cctatccaaggacctgagatagcaagcagacagcgagctggttatcatcccctgtctcat
ggtatagctagttctttctctgcagggattcaaccactcatatcagaaccaaagaatgat
gaggtattccatggatatggattgcaaaagaagaatttgcaacaagcaggtcagccatca
gatgtaggtgtaccacataatccaccatttttaaataacaaaagggggccaactgatagt
ggaaattcgaacctgctacaaccatctttatcggtaggagtactgcaggaaataggacaa
agatgtggttctaaggttgaatatagatccatcttgagctctagcagggattggccgttc
tcttatgaggtgttattcactggtgagaaagtaggcgttgggatgggtaagacccggaaa
gatgcacaacaacaggctgctgaaaatgcccttcgcagcctagctgacaaatatgtagca
cacgtgatctcccaatcagaaacagtgaagaaagatcctgataatgaagtggaaaatgga
tttttatgggaatctgatgcagatgaatcacctgtgaaagatgcatcggaggttgctgaa
atgaggcgttcctccaattcaacgggacagcttgttcagaagtcgaatcactaa
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