Helianthus annuus (common sunflower): 110909912 Help Entry 110909912         CDS       T05101                                  Name (RefSeq) symplekin   KO K06100   symplekin Organism han  Helianthus annuus (common sunflower) Pathway han03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:han00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     110909912  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:han03021]     110909912    03019 Messenger RNA biogenesis [BR:han03019]     110909912 Transcription machinery [BR:han03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      110909912 Messenger RNA biogenesis [BR:han03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      110909912     U7-dependent histone pre-mRNA processing factors      110909912 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N HEAT_2 HEAT_EZ Hid1 Motif Other DBs NCBI-GeneID:  110909912 NCBI-ProteinID:  XP_022010333 LinkDB All DBs Position 15:254920..263547 Genome browser AA seq 1326 aa AA seqDB search MVGMISMEKFSGLIHSAKFSSDVPSKLDNLRKLKDLDPHLLSHLFPQLLDLHTDRSSPVR RFLAEIAGDVGLNNTDLFPDIVPLLLTLLRDATPAVARQAITCGITLFRRSLIKTAIQGL YSSDLHDSLQSSWLWMLKLKDEIYSMAYQPHSDGRQLLALKFVEAVTLLYTADPSASTEP PEDHTSRDEFNIAWLRGGHPILNVADLSVEASKNLGLLLDQLRYPAVKSLSNMVVIVLIK SLSEIAKKRPAFYGRILPVLLGLDPSTSAVKAGHVSGVHHALKNAFLTCLKCMHPGAVPW RDRLVGSLREMKAGDLAEEALQQVLRGNSSTTQDIKPSIESCDAVHSSAVRKRPEVQDVN KDDDVPGKRVKPNEELKGKSSSKQNVESGPVQQLISMFSSLVAQGEQSAAMLEILISSIS ADLLAQVVMANMPNLPPVRPIEEAENTESYPATAGGANLSAYLTDILSKSTKPQVTHSDF ETHNDEEPEMEGEQPATKDSDDVADSTTNQGLVPSVPPVFLNIPPSIPIAGLGTPSEDID IGELEDGIPGLESSAKNDGMPEITKMDMSPVDLEDNSRDQITKMDIVPSVSMSTDRSEEL SPKAETNSNNSSTLTSLQLTSKVVLPKMSAPVVNLTDEQKDHIQKSAFIRIIEAYKHIAV AGGSELRFSLLSYLGVEFPLELDPWRFLQTHILSDYTNHEGHELTLRVLYRLFGEAEADH DFFSSTTATSVYEMFLLKVAEALRDSFPPSDKSLSRLLNEVPYLPKSVVKLLEWLCVPGN SEEVHSGDRVHQGLSIVWSLILHRPPTRDACLKIALQSAVHHLEEVQTKAIRLVANKLYP MPSISQQIEDFAKDMLLSAMNADTSVDDGSNTELAMDTQMEKPMTESVSANTKDGSSEGT SENIPSSSVTDAQRCMSLYFALCTKKHSLFRQLLVVYKNMSKAAKQAISVQIPKLVRTIG SSSQLLEIIADPPAGSENLLMQVVQTLTDGAIPSPELIATIKKLYDTKLKDAEILIPVLP FLPKDEVLQMFSCFVNLPLDKFQAALARTLQESSEGGAGLTPAEVLIAIHGIDPDKDGIP LKKVTDACNTCFQQRQIFTQQVLAKVLNQLVEQIPLPMLFMRTVIQTIGAFPALVDFIME ILSRLVSKQIWKNQKLWVGFLKCAQLTKPQSFTVLLQLPPAQLEIALNKQPVLKAPLASY ASQPDIRTSLPRSILAVLGIQQDSQTESQGQTTQSQAQSQTVSQAQSHTQSQAQSHTQSQ AQSHTQSPAQSHTQSQAQSHTQSQAQSQTQSQAQSQTQSQAQSQTVDTGNSGKDVAAEEP KESSSS NT seq 3981 nt NT seq  +upstreamnt  +downstreamnt atggtgggaatgatttcgatggagaagttttccggcctcattcactccgccaaattctcc agcgatgtcccttcgaagctggacaacttacgcaagcttaaagatctcgaccctcacctc ctctcacacttgttccctcaacttctcgatcttcacaccgaccgctccagccccgttcgc agattccttgcagagatcgctggcgatgttgggttgaataacacggatttattccctgat attgtacctcttttgttaactctcttaagagatgctacacctgccgttgctagacaggcc atcacttgtggaatcactttattccgacgctctcttatcaaaactgctattcagggcctg tattcaagtgacctccatgattctctccagtcatcatggttatggatgttgaagcttaaa gatgaaatttattctatggcataccagcctcacagcgatgggagacagttgcttgcactc aaattcgttgaagcagtcactcttttatatacagctgatcctagtgcttctactgaacca cctgaagatcacacttctagagatgaatttaacatagcatggcttcgtgggggccatccc atacttaatgttgctgatttatcagtagaagccagcaagaatctgggtttgttgcttgac cagctaagatatccagcagtcaagtcactcagcaatatggttgttattgtgttaattaag agtctttcagaaattgctaagaaaaggcctgcattttatggccgtattcttccggtttta cttgggttggatccatcaacttctgctgtgaaagctggtcatgtttccggggttcatcat gctttaaaaaatgcttttcttacctgcttgaaatgcatgcacccgggtgctgtaccgtgg cgagatcgtttagttggatcacttagggaaatgaaagctggtgatttggctgaagaagct cttcagcaagttcttaggggtaattcatcgaccacacaggatataaaaccttccatagaa tcatgtgatgctgtgcattccagtgcggttaggaaaaggcctgaagtacaggatgttaat aaagatgatgatgtacctggaaagcgtgtgaaaccgaatgaggagttgaaggggaagtcc tcaagcaaacagaatgtagagagtggacctgtgcagcagcttatttctatgttcagttca ttggttgcacagggtgaacagtctgcagcaatgctagaaattcttattagtagtatttca gccgatttacttgctcaagtagtcatggccaacatgccaaatcttcctccagttcgccct atagaagaggctgagaacaccgagtcctatcctgctacagctggtggtgctaatctgtct gcatatttgaccgacatattatcaaaatccaccaaacctcaagtcacacattctgatttt gagacacacaatgatgaggaacctgaaatggagggtgaacagcctgcaacaaaagacagt gatgatgtagcagattctaccaccaatcagggtttggtaccttccgtcccacctgttttt cttaatataccaccatcaataccgattgctggcttaggtactccatctgaagatatagat ataggcgaacttgaggatggcatacctggtctggaatcatcagccaagaatgatggaatg cctgaaattaccaaaatggacatgtcaccagttgacttggaagataacagtcgagaccaa attaccaaaatggatatagttccttcggtgtctatgtctacagacagatctgaggaactt agtccaaaagcagaaacaaatagcaacaattcctcaacattaacttctcttcagttaaca tctaaagttgtcctgccaaaaatgtctgcacctgttgttaatctcactgatgaacagaag gatcacatacagaaatcagcctttatacgcatcattgaagcctataaacatatagcagtt gctggtggttcagagcttcgtttttctttactttcctatttaggagttgagtttcctttg gagttggacccttggagatttcttcaaacacacatactctctgattatacaaatcatgag gggcatgagttaaccttgcgcgtcctctatagattatttggagaagcagaagcagaccat gacttcttttcttcaacaacagcaacttctgtttatgaaatgtttcttctcaaagtggca gaagcactcagagattcgttcccaccctctgacaaatctttgagtagattgctaaacgaa gttccatacctgccaaaatcagttgttaaattattagagtggttgtgtgttcctggaaac agtgaggaagtgcacagtggagatagagtgcatcaaggtcttagcatcgtttggagctta attctgcatagaccccccactagagatgcctgcctaaaaattgctttacagagtgcagtg catcacttggaggaagtacaaacgaaggccatacgtttggtggcaaacaagctttatcct atgccctccatttctcagcaaattgaagattttgcaaaggatatgctattatctgcaatg aatgctgatacttcggttgatgatggctccaatactgaattagccatggacacacagatg gaaaaacctatgactgagtcagtaagtgccaacaccaaggatggttcttctgagggtaca tctgaaaacattccatcctcctcggtaaccgatgcacaacgatgcatgtcactatatttt gccctttgtacaaagaaacattctcttttccgtcaactgttagttgtgtacaagaacatg tcaaaagctgcaaagcaggcaattagtgtccaaatcccgaaactagttcgcacaattggc tcatcatctcagcttcttgaaattattgcagacccacctgctggaagtgagaaccttctg atgcaggttgtacaaacactaacagatggggcaattccctctcctgagttgatagctacc attaaaaagttatatgacacaaaattaaaggatgctgagattcttattccagtattaccg ttcctgccgaaagatgaggttcttcagatgttttcttgttttgtaaatcttccactagat aagtttcaggctgcacttgcccgtaccttgcaggaatcatccgagggtggtgcaggtctt actccagctgaagtgctgattgctatccatggcattgatcctgacaaagatgggattccc ctcaagaaggttacagatgcatgcaacacttgctttcagcaacgacagatatttacgcaa caagttctagcaaaagttttaaatcagctggtggagcaaatacctctgccaatgctgttc atgcggacagtaatacagacaattggtgcatttcccgccctggttgattttattatggag attctatctcgtcttgtgagcaagcagatttggaaaaaccaaaagctgtgggtaggattc ttaaaatgtgctcagctaacaaagcctcaatctttcaccgttctacttcagcttcctcct gcacagctggaaatagcattgaataaacagccggtactcaaggctcccttggcttcctat gcaagccaaccagacattcgtacatcacttccaaggtccatactggcggttcttggaata caacaggactctcaaactgagagtcaggggcaaaccacacagtctcaggcccaatcacag acagtgtctcaggcccagtctcatacacagtctcaggcccagtctcatacacagtctcag gcccagtctcatacacagtctccagcccagtcacatacacagtcgcaggcccagtcacat acacagtctcaggctcagtcacaaacacagtcgcaggcccagtcacaaacacagtcgcag gctcagtcacaaacagtagacacaggcaattcagggaaagatgtggcagctgaggaacca aaagaatcaagtagcagctga

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