Helianthus annuus (common sunflower): 110910197
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Entry
110910197 CDS
T05101
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
han00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110910197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110910197
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110910197
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_14
Motif
Other DBs
NCBI-GeneID:
110910197
NCBI-ProteinID:
XP_022010591
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Position
15:complement(4379361..4385486)
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AA seq
580 aa
AA seq
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MFPEEVLEHVFSFLNSHTDRNTASLVCKSWYEMERWCRKRVFIGNCYAVNPRVVIRRFPE
VKSVELKGKPHFADFNLVPEGWGGYVYPWIVEIARAYPWLEEIRLKRMVVTDECLEIVAK
SFRNFRVLVLESCEGFSTDGLAAVAANCRNLRVLDLRECEVEELSGHWLSHFPDSFTSLE
SLNMACLGSEVSFSALERLVARSPNLKTLRLNRTVPIEKLSTLLQRAPQLVDFGTGAYSA
EIRQDVYSRLADAFSRSKNLKSLSGFWDVTPAYLPAIYSVCSQLTSLNLSYAATRSPDLT
KIVSQCYNLQRLVVLDYIEDTGLNTVSMSCKDLRELVVFPSDPFVGEVDVLLTEQGLVSV
SQGCSKLQSVLYFCHQMSNSALISISKNRPNLTCFRLCIIEPRVPDYVTHEPLDVGFGSI
VENCKQLTRLSMSGLLTDRVFEYIGTHAKNLDMLSIAFAGDSDLGLHHVLSGCDSLRKLE
IRDCPFGDKALLANASKLEKMRSLWMSSCLVSFGACKLLGQKMPGLNVEVIDERENVNSL
PEYVPVEKVYIYRTVSGQRFDTPDFVRIMGKDKDDLYNLS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtttccagaagaggtgttggaacacgtgttttcgtttttgaactcgcatacggaccgc
aatacggcgtcgttggtgtgtaaatcatggtatgagatggaacggtggtgccggaaacgt
gtgtttattggaaattgttacgctgtaaaccctagggttgtgattaggaggtttccggag
gtgaaatcggttgagttgaaagggaaaccgcattttgcggattttaatttggtgccggaa
gggtggggagggtatgtgtatccgtggattgtggagattgctagggcgtatccgtggttg
gaggagattaggttgaaacggatggttgttacggatgagtgtttggagattgtggcgaaa
tcgtttcggaattttagggttttggtattggagtcatgtgaggggtttagtactgatgga
ttagctgctgttgctgctaattgcagaaatctaagagtactcgatttacgtgagtgtgaa
gttgaagaactaagtggacattggctgagtcacttccctgactcatttacctcactagaa
tctcttaacatggcttgtttgggttccgaggttagtttctcagccctcgaacggttggtt
gccaggtcacccaatttgaaaacccttcgactaaaccgcaccgtacccattgagaaactt
tcgacactcttacaacgtgccccgcagctcgttgattttggaacgggtgcttactcagct
gaaatccggcaagatgtttattcacgtttagcagatgctttttcacgctctaagaatctt
aaaagcttatcagggttttgggatgtgactccagcttatcttccagctatatactctgtg
tgctctcagcttacttctttaaatttgagctatgcagctactcgaagtcctgatcttacg
aagattgttagtcaatgttacaatttgcagcgtctagtggtgttagattacatagaggat
acgggcctaaacaccgtttctatgtcatgtaaagatctacgagaactggtggttttccca
tccgacccatttgtcggcgaagtagacgtacttttaaccgaacaaggtcttgtttcagtt
tcacaaggttgctccaaactccaatcggttttatatttctgtcaccaaatgtcaaattca
gcgttaatttcaatctccaaaaaccgtcccaacctaacctgcttccgtttatgcattatc
gaaccccgtgtcccggattacgtaacacatgaacccctagatgtcggcttcggttccata
gttgaaaactgcaaacagcttacacgcctttcaatgtcaggccttctcacagaccgcgta
tttgaatacatcgggacccacgctaaaaacctggatatgctttcaatagctttcgcaggg
gacagtgatttagggctgcatcatgttttatccgggtgtgatagtttaaggaagttggag
attcgagattgcccgtttggcgataaagctttgcttgcgaatgcttcaaagttggagaaa
atgcgatccctttggatgtcttcgtgtttggttagttttggagcgtgtaaattacttggt
cagaaaatgcctggtttaaacgttgaagttattgatgaacgcgaaaatgtaaactcgcta
cccgaatacgtgccggttgaaaaggtttatatttacagaacggtttctggtcaaaggttt
gacaccccggattttgtacgtataatgggtaaagataaagacgacctgtacaatctttca
tga
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