Helianthus annuus (common sunflower): 110910254
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Entry
110910254 CDS
T05101
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110910254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
han03400
]
110910254
Enzymes [BR:
han01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
110910254
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
110910254
DNA repair and recombination proteins [BR:
han03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110910254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
NFACT_N
Motif
Other DBs
NCBI-GeneID:
110910254
NCBI-ProteinID:
XP_022010641
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All DBs
Position
2:complement(10284420..10291294)
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AA seq
405 aa
AA seq
DB search
MPELPEVEAARRAIAENCIGKKIIRSIVADDAKVIDGVSRADFEASLTGKTIVGAHRKGK
NMWIELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVSDTDEWPSKYSKVFIELDDGLEL
SFTDKRRFAKVRLLKNPATVAPISELGPDALLEPMTEDELFKALSKKKIAIKALLLDQSF
ISGVGNWIADEVLYQAKIHPLQSAATIPKEGCAALHKSLKEVIKQAVEVGADSSQYPSNW
IFHSREKKPGKAFVDGKTIDFIKSGGRTTAYVPELQKLTGDQVVKAAVKPQKKSSNKNND
EAESEGEEIAKPKGGKKTTKSRAKKAPAKRKPDTSDDNDDDVDDEKKPATKNKSTGGNKK
STARKKSKESESDEDDGDGDEDEVKGKEEVAKKVQTGRPTRKRAK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttccagaggtggaagcggctagaagagccattgcagagaactgtatcgga
aagaagatcatacgatctatcgttgccgacgatgctaaagtcatcgacggtgtttcacgt
gccgattttgaagcatctctcaccggaaaaacaatcgtcggagctcatcgtaaggggaag
aatatgtggattgagcttgattctcctccttttccgtcgtttcagttcggaatggcgggt
gctatatatatcaaaggtgtcgctgtaaccaagtataaaaggtctgcagttagcgataca
gatgagtggccttccaaatattccaaggtttttatagaactagatgatggtttggagcta
tcgtttactgacaaaaggcgatttgcaaaagttcgcttactaaaaaatccggctactgtg
gccccgatatctgaacttggtccagatgccttattggagccaatgacagaagatgaactc
tttaaagcactgagcaagaagaagattgctataaaggctctcttactcgatcagagcttt
atctcaggtgttggcaattggattgcggatgaagtgctatatcaggcaaaaatccatcca
ctacagagtgctgccaccattcccaaagaaggatgtgcagcactgcacaagtcccttaaa
gaggtcatcaagcaagctgttgaagttggggctgatagtagtcagtatcctagtaactgg
attttccattccagagaaaagaagcccgggaaggcttttgttgatggaaagacgattgac
tttatcaaatctggaggcaggacaaccgcatacgtacctgaattacaaaagctaactgga
gaccaagtggtcaaagcagcggtcaaaccacagaagaagtccagcaataagaacaatgac
gaagccgaaagtgagggcgaagaaattgcaaaaccgaaaggagggaagaaaacaaccaaa
agtagagctaagaaggctcctgcaaaacgcaagcccgacacaagtgatgacaatgatgat
gacgtcgacgatgagaaaaaacctgccacgaaaaataagtcaacgggtggtaataagaag
tcaactgcaagaaagaagtcaaaggaaagtgagagcgatgaagatgacggtgatggtgat
gaggatgaagtgaagggaaaagaggaggttgctaagaaagtgcagactggtaggccgact
aggaagagggcaaaatag
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