KEGG   Helianthus annuus (common sunflower): 110910366
Entry
110910366         CDS       T05101                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110910366
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110910366
   03041 Spliceosome [BR:han03041]
    110910366
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     110910366
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110910366
Spliceosome [BR:han03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    110910366
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 110910366
NCBI-ProteinID: XP_022010730
LinkDB
Position
14:71803812..71806913
AA seq 443 aa
MAKKRKTRASQPSQDQPPVDEQPVAVKEEEQEPEEEEPYEENQEEINEQDEEEQEEEEQS
DEETTGNDVKEVKIESNGEDLTEEPVEKLLEPFSKEQLVLLMKEAVSKYPDLIGSVEKIA
DADPAHRKIFVHGLGWDTTTETLIREYSKYGEIEDCKAVVDKTTGKSKGYGFILFKHRAG
ARKALKEPQKKIGNRITSCQLASAGPVPAPPPNGPQVSEYTQRKIFVSNVAAEIDPQKLT
EFFAKFGEIEEGPLGLDKQTGKPKGFALFVYKSIESAKKALEEPHKIFEGHTLNCQKAVD
GPKPVKGGFGQHQQFGGHHHQPSKKAKYSGGRGGGAGQGHMMASSGPPVGYSPPIPPQGA
LTPVLGQALTAFLASQGAGLGIGNLLGGLGAPANPQGMPHVGSNPGYGNQGGAGYQQGGY
ANPQMGQGGSRPQQGGGYMGQGH
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggccaagaagcgaaagactcgagcttcacaaccgtcacaagatcaaccaccggtcgac
gaacaacccgtcgccgttaaggaagaagaacaagagccagaagaagaagaaccctatgaa
gaaaatcaagaagaaatcaatgaacaagacgaggaggaacaagaagaagaagaacaatcc
gacgaagaaaccaccggaaacgacgtcaaagaagttaaaattgaatccaacggtgaagat
ttaaccgaagaacccgtagagaagcttctggaaccgttttcgaaagaacaattggtctta
ttaatgaaagaggcggtttccaagtatccggatttaatcgggagtgtcgaaaagatagcc
gatgcagatccggctcaccgaaagatattcgttcacggtttagggtgggatacgacaact
gaaacgttaattagagagtattcaaagtacggtgagattgaggattgtaaagctgtagtg
gataagacgactggtaagtcgaaaggatacgggtttatattgtttaaacatagagcgggt
gcgaggaaggcgttgaaggagccgcagaagaagattgggaacaggattacttcgtgtcag
ttggcgtctgcagggccggttccagcccctccaccgaatgggcctcaggtgtcggagtat
acgcagaggaagatttttgtgagtaatgtggcggccgagattgatccgcagaagcttacg
gagtttttcgccaagtttggggagattgaggaggggccattggggttggataagcagacg
gggaagccgaaggggtttgcgttgtttgtgtataagagcattgagagtgcgaagaaggcg
ttggaggagccgcataagatattcgaagggcatactttgaattgtcagaaagcggttgat
gggccgaaaccggtgaaagggggttttggtcaacatcagcagtttggtgggcatcatcat
caaccgtcgaagaaggcgaagtattctggcggcagaggtggtggtgcagggcaaggtcat
atgatggcgtcttctggaccgcctgtgggatattcgcctcctattccgccacagggggcg
ttgactcctgttttggggcaggcgttgactgcctttttggcttcgcagggagcggggctt
ggaattggtaatcttttaggaggtctcggtgcgcctgcgaacccgcaggggatgccgcat
gttgggagcaatcctgggtacgggaatcaaggcggtgcggggtatcagcaaggtgggtat
gctaatccacagatgggtcaaggaggcagcaggccacaacaaggtggtggatatatgggc
cagggtcactag

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