Helianthus annuus (common sunflower): 110910464
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Entry
110910464 CDS
T05101
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110910464
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110910464
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110910464
NCBI-ProteinID:
XP_022010804
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Position
15:complement(9020674..9028752)
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AA seq
440 aa
AA seq
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MAVGFRYFALFLLLICIHSVYVNAVSRVNEKIELQSLIENSTMVERRSEEIAIEKNDRAV
DENPEMVASMVDMTIRNSTERRELGFLSCGTGNPIDDCWRCDRNWRRNRKRLADCAIGFG
RNAVGGRDGRYYVVTDPNDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVITLKQELLMNS
FKTIDARGVNVHISNGACITIQYITNVIIHGLHVHDCKPTGNAMVRSSPSHYGWRTMADG
DAISIFGSSHIWVDHNSLSNCADGLVDAIMGSTAITISNNYFTHHNEVMLLGHSDTYHRD
KIMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYLA
PVNPFAKEVTHRVTSGRWRHWNWRSEGDLMLNGAFFTPSGNGAGASYARASSLSAKPSSV
VASLTSGAGALDCRKGKVAC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcggtttcagatattttgcactctttctattgctgatctgtatacattctgta
tatgtcaatgctgtatcaagagtaaatgagaaaattgagttgcagagcttaattgagaac
tcaacaatggtggaaaggagaagtgaagaaattgctattgaaaagaacgatagagctgtt
gatgagaatccggaaatggttgcttccatggttgacatgaccatccggaacagtacagaa
aggagggaattaggatttttgtcatgtgggaccggaaacccaatcgacgattgctggcgg
tgtgaccgaaactggcggcgcaaccgcaagcgcctagcagattgtgctattggattcggg
cgtaacgccgtcggtggacgtgacggacgttactacgtcgttacagaccccaacgacgat
gacccagtaaaccctagacccggaaccctaagacacgcagtcattcaagacgaacctcta
tggatcgttttcaagagagacatggttataacactaaaacaagaactattgatgaacagt
ttcaaaacaatcgatgctcgtggtgtcaatgttcatatctcgaatggcgcttgcatcacg
attcaatatattacgaatgtgatcattcacggtttgcatgttcacgactgcaaaccaacg
ggaaatgccatggttcgaagctcaccgtcgcactatggatggagaaccatggcggatggt
gatgcgatttcgatctttggatcgagccatatttgggtcgatcataactcactttctaat
tgcgctgacgggctcgttgacgccatcatgggctcaaccgcgatcaccatttctaacaat
tacttcactcaccacaatgaggttatgttattgggtcatagtgacacctatcatagggat
aagattatgcaagtgactattgcatataatcattttggtgaaggtctagttcaaagaatg
ccaaggtgtaggcacgggtatttccacgttgtaaataacgactacacgcactgggaaatg
tatgctatcggtggcagtgcggatccaactattaacagccaaggaaaccgataccttgcc
ccggttaacccgttcgctaaagaggtgactcatagagtaacatcgggccgatggagacac
tggaattggagatcagaaggtgacttaatgttaaatggtgcattctttacaccatcaggt
aatggtgcaggagccagctatgcgcgtgcatcgagcctaagtgctaaaccgtcgtcggtt
gtggcctcgctcacttcaggagccggtgcacttgactgtcgaaaaggcaaagtcgcatgt
taa
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