Helianthus annuus (common sunflower): 110910724
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Entry
110910724 CDS
T05101
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110910724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110910724
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
110910724
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
DUF1258
ZnF_RZ-type
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
110910724
NCBI-ProteinID:
XP_022011015
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All DBs
Position
15:12803491..12809100
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AA seq
545 aa
AA seq
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MSFDLVLNPSCDGCRSTVELYGSNCKHMTLCVACGKTMAERKDRCRDCGATITRLIREYN
VRASAASDKNYFIGRFVTGLPSFSKKKNDNKWSLQKEGLQGRQVSDTLREKYKNKPWLLE
DETGQFQYQGVLEGAQTATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKIK
NRRKTADGYQRWMMKAANGGAAAFGEVERFDDKESGGAGGRGGRKKNNADDDEANVSDRG
EEDEDEESARKTRLGLNKRGGDDDEEGPRGGDLDGDDDDIEKGDDWEHEEIFTDDDEGVA
NDPEEREDLAPEIPAPPEIKQDDEDEEDNEEEEGGLSQSGKELKKLLGKNSGANESEPEQ
EDDDDDDDDIEDESSPVLAPKANNNGGPSKRNNNPLKEEPVDNSPSKPAAATTSARGTPS
SNKSAKGKRKSTEENKPSNGAATASKKVKTENDVKHVKEEPAKAGKGSSSKPAGAGASSA
TGPVTEEEISAVLLHNAPVTTQDLVAKFKSRLRTKEDKNAFAEILRRISKIQKTNGANYV
VLRDR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgatttggtgctgaatccgtcgtgtgacggttgcagatcgacggtggagttg
tatggtagcaattgtaaacacatgacgctttgtgtggcttgtggcaagaccatggctgag
cgcaaggaccggtgccgtgattgtggcgccaccatcactcgtttaattagggaatacaat
gtgcgtgcaagtgcagccagcgataagaattacttcataggaaggtttgtgactggttta
ccaagtttctcaaagaagaaaaatgacaacaagtggtctctccagaaagaaggattacag
ggacgtcaagtcagcgacaccctacgggagaaatacaagaacaaaccttggcttttggaa
gatgaaactgggcaatttcagtatcagggtgtactcgagggtgcacaaacggcaacatac
taccttctcatgctgcaggggaaggagtttgttgcgatccctgctggttcatggtacaac
ttcaacaaagttgcacagtataagcagcttacgcttgaggaagcagaagaaaagattaaa
aacagaaggaaaactgccgatggttatcagagatggatgatgaaagcagcaaacggcgga
gctgctgcttttggtgaagttgaaaggtttgatgacaaggaaagcggtggagcgggtggg
agaggggggcgtaaaaagaataacgccgatgatgacgaggcaaacgtgtcagaccgggga
gaagaagatgaagacgaggagtctgctaggaaaacgagacttggacttaataagagaggt
ggcgatgatgatgaggaaggtcctagaggcggtgatcttgatggtgatgatgatgacatt
gagaagggtgatgactgggagcatgaggaaattttcacagatgacgatgaaggtgtggcc
aacgatcccgaggaacgggaagatttggcccctgaaatccctgctcctccagaaatcaag
caggatgacgaagatgaggaggataatgaagaagaggaaggaggactgagccaatctgga
aaagagttgaagaagctgctcgggaaaaatagtggggccaatgaatccgagccagagcaa
gaggatgatgacgatgacgacgatgatattgaagacgaaagttcccctgttcttgcacca
aaggctaataataacgggggtccatcaaagcgtaataacaaccctcttaaagaggaaccc
gtcgacaatagcccctcaaagccagcagctgctacaacatcagctcggggaaccccatct
tcaaacaagtcggctaagggaaagcgaaaaagcactgaagagaacaaaccgtcaaatggt
gccgccacagcttcaaagaaagtcaaaaccgaaaatgacgtgaaacatgtaaaggaggag
cctgcaaaggccggtaaaggttcttcttctaaaccagcaggtgcaggtgcctcatctgct
accggacctgtcacggaagaagaaatttcggcggttctgctgcacaacgcacctgtcacc
acacaggatcttgttgctaagtttaaatcccgcttacgcaccaaagaggacaaaaatgcg
tttgcagaaattctgagaaggatttccaagatacagaagaccaacggtgccaactatgtg
gtgctgagagaccgatga
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