Helianthus annuus (common sunflower): 110911145
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Entry
110911145 CDS
T05101
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110911145
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110911145
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110911145
NCBI-ProteinID:
XP_022011425
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Position
15:complement(28566563..28567950)
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AA seq
376 aa
AA seq
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MIFSETMFSNRRGLIRHKKHDGPCKAHNIIDKCWRCDPKWADNRQKIAGCVQGFGHNTVG
GKGGKVYIVTNPADGDVMNPKPGTLRHAVLQPEPLWIIFAGHMNIRLCRELLFTSHKTID
GRGFHIHIAGGAGFMLQNIKNVIIFNIHMYDISPAKGGMIRSSPHHVGIRGASDGDAICI
FGSTDIWIDHCSFAGSYDGLIDIVARSTDITISNNHFVRHDKALLFGASDETPDENMRVT
LAYNHFGKGLTQRLPAVRWGFVHVVNNDYTMWKCYAIGGAKGATIISQGNRFKAEHGAVK
EVTHRNFAEKSEWCKWTWRSEGDLMLNGAFFVMSGNPNWAAAYKGYPLLKPEPAHRVHEL
TNFAGATLGCRVGLPC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgattttcagtgaaaccatgtttagcaacaggagggggctgattagacataaaaaacat
gacggcccatgcaaggcccataacattatcgacaaatgttggcgatgcgaccccaaatgg
gccgacaaccgtcaaaaaattgccgggtgtgtccaagggtttggacacaatactgtcggc
gggaaaggtggcaaagtctacattgtcaccaaccccgccgatggtgacgtgatgaaccct
aaaccgggtaccctacgccatgcagtcctccaacccgaaccactatggatcattttcgcg
ggccacatgaatattaggctctgccgcgagcttctttttacgagccacaagaccatcgat
ggccgcgggtttcacatccacatcgcgggtggggccgggttcatgttacaaaatattaaa
aatgtcatcatcttcaacatccatatgtatgatatctcaccagctaagggtggcatgata
agatcatcccctcatcatgttggaattagaggagcaagtgacggtgacgccatttgcata
ttcgggtctactgacatatggatcgatcattgctcgttcgcgggctcatacgatggcctc
attgatatcgttgcgcgttccaccgatatcaccatctcgaataaccatttcgttagacac
gataaggctttgttatttggtgcaagcgacgagaccccggatgaaaacatgagagtcacg
ctcgcttacaaccactttggaaaaggacttacgcaacgactgccagcggtgcgatggggg
tttgttcatgtcgtgaacaacgactacacgatgtggaagtgctacgcgattggaggtgca
aaaggggcgacgatcatcagccaggggaaccgcttcaaagcggaacacggtgcagtcaag
gaagtgactcacagaaactttgcagagaaatcagaatggtgtaagtggacatggagatca
gagggagacctgatgctaaatggagcattctttgttatgtcaggaaaccctaattgggca
gcagcatacaagggttacccattgttgaaaccggaaccggctcatagggttcatgagctc
accaactttgcgggtgccaccctcggatgccgagtaggattaccatgttaa
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