Helianthus annuus (common sunflower): 110911341
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Entry
110911341 CDS
T05101
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic isoform X1
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110911341
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110911341
Spliceosome [BR:
han03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110911341
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
IstB_IS21
XhlA
Motif
Other DBs
NCBI-GeneID:
110911341
NCBI-ProteinID:
XP_035840434
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All DBs
Position
15:45359320..45369798
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AA seq
1188 aa
AA seq
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MLLLYTTVRHNLIHPAMNNILSSPSSSSSISPLQNPNFQISLHHYYFNLKSHSPNILPFT
FHRSFQPLHHCNFHFNVRCSYKLPRSNLPVGESPVVSDTEEDDEEDDEEAAAEYEVDAEF
SEAIEADSDDEVEAESDENVVVVEQSRFEEFKWQRIERIRNDVREYGDGILDVDELSSVY
NFRIDKFQRLAIQAFLRGSSVVVSAPTSAGKTLIAEAAAVATVARGKRLFYTTPLKALSN
QKFREFCDAFGEDNVGLLTGDSAINRDAPVLIMTTEILRNMLYQSVGIMSSESGLFNVDV
IVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELSGWINQIHGKTELVTS
TKRPVPLNWHFSTKSALLPLLNETGTGMNRKLSTNYLQLNSLGGTSYEEERPRRRNSRKY
ENDVSPSSKNDKSNIRRSQVPQVIDTLCHLKTRDMLPAVWFIFSRKGCDVAVQYLEDCKL
LDECEMSEVDLALKRFRLKYPDAVRESAVKGILRGVAAHHAGCLPLWKSFIEELFQKGLV
KVVFATETLAAGINMPARTAVISSLSKRSESGRIQLTTNELLQMAGRAGRRGIDKTGHAV
VVQTPYEGAEECCKLLLAGLQPLVSQFTASYGMVLNLLAGAKVTQIPNEGDGTVVSRTGR
TLEEARKLVEQSFGNYVGSNVMLAAQDELNKIQDEIRILTSEISDEAIDRKSKSILSKSA
YKEMADLQEELRAEKRVRTELRRRMEMERMSSLRPLLQTLDNGHLPFLCLHYHDNAGTKH
LVPVVYLGDVDSMHGSKLKNMVVENDSFAIKIISVDGVDLESQLTTRPSYYVALGSDNTW
YLFTERCIKTVYRAGFPNTALNNGDALPREIMAAHLEKMEMQWQKLSHTELGAIWCMEGS
LETWSWSLNVPVLSSLSEDNEVVQYSQAYYDAVESYKNQRNKVSQLKKKIAKTEGFKEYK
KIVDVARFTEEKIQRLKARSNRLMTRLEQIEPSGWKEFTQVSNVIHEIRALDINTHVIFP
LGETAAALRGENELWIAMVLRNKILFNLKPPQLAAVCGSIVSEGIKVRPSKNNSYIYEPS
STVLEVINFLDDQRRSLLQLQEKHDVKIPCCLDSQFSGMVEAWASGLTWREMMMDCAMDE
GDLARLLRRTIDVLAQIPKLPDIDPQLQRNAIAASGVMDRPPISELAG
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgttattgttgtacacaaccgtacgccacaacctcatccatcccgccatgaacaacata
ctctcatctccttcttcatcttcttcaatctccccccttcaaaaccctaattttcaaatc
tctctccaccattattacttcaacctcaaatctcactctccaaacatcctccctttcact
ttccacagatcctttcaacctctccaccactgcaattttcacttcaatgttcggtgcagt
tacaagctaccgagatcgaatctgccagtaggcgagtctccggtggtttcggatacggaa
gaagatgacgaagaagacgatgaggaagcagcggcagagtacgaagtggatgcggagttt
agtgaggcgattgaggcggatagtgacgatgaggttgaggctgagagtgatgagaatgtt
gttgttgtagaacaatctaggtttgaggagtttaagtggcagaggattgagaggattcgg
aatgatgtgagagagtatggtgatggaattttggatgttgatgagctttcttcggtttat
aacttcaggattgataagtttcagcggttagcaattcaagcttttctgagaggttcttca
gttgtagtttcggcacccacaagtgcgggtaaaactctgattgctgaagctgcagctgtt
gctacagtagctagagggaaaagattgttctatactactcctctcaaggcactatctaat
cagaaattccgcgagttttgtgatgcatttggtgaagacaatgttggtcttctcactgga
gattctgccattaacagggacgcaccggttctaattatgaccactgagatccttcggaac
atgttatatcagagtgtcggaattatgtcatcggaaagtggacttttcaacgttgatgtg
attgttctggatgaagtacactatcttagtgacatatcgcggggtacagtctgggaagag
atagttatatattgtccaaaagaagttcagcttatatgcttgtcagctacagtagcaaat
ccagatgagttatctggttggattaatcagattcatggaaaaaccgagctagtaacatca
acaaaacgtccggttcctttaaattggcacttttctaccaaatcagctttgcttcccctt
ctcaatgaaacgggaaccggcatgaataggaagttatcaaccaattatctgcaacttaat
tccttgggaggcacgtcatacgaggaagaacggccgagaaggaggaactcaagaaagtat
gaaaacgatgtatcaccttcttcaaagaatgacaaaagcaacattcggcgttcacaggtt
ccgcaagttatagatacattatgtcaccttaaaacaagggatatgctgcctgcagtgtgg
tttatctttagccgaaaagggtgtgatgtggcagttcagtatctcgaagactgcaagctt
ttagacgagtgcgaaatgagcgaagttgatctggccttaaaacggttcagactcaagtat
ccagacgccgttagggaatcagccgtgaaagggatacttagaggcgttgcagctcaccat
gccggctgtttacctctttggaagtcttttatagaagaattgtttcagaaaggacttgtt
aaagtcgttttcgctaccgaaacacttgcggctgggatcaacatgcctgcacggacggct
gtgatttcatcactcagcaagaggagtgaaagtgggcggatccagttaaccaccaacgag
ctgcttcaaatggcgggccgggctgggcgaagaggcatagataaaacgggccatgcggtt
gttgttcagactccgtatgaaggagctgaagaatgttgtaaacttcttttagctgggtta
caaccgcttgtttcgcagtttactgcttcgtatggaatggttctcaatcttcttgcgggt
gcaaaagttactcagataccgaatgaaggagatggtacggttgtttctagaacaggacga
accctagaggaagcaagaaagttagttgagcagagtttcggaaattacgttgggagtaac
gttatgcttgctgctcaagatgaacttaataagatacaagacgagattcggattttgact
tctgaaattagtgatgaagctattgacaggaagagcaagagtattttatcgaaatcagca
tacaaagaaatggcagatttgcaggaagagctcagagcagaaaaacgtgttcgaacagag
ctgcgtagaagaatggaaatggaaagaatgtcttctttgagaccgttgctgcaaacattg
gataacggacatttaccttttttgtgtttgcattatcatgataatgctgggactaaacat
ttggtccctgttgtttatttaggcgatgttgattctatgcatggttcaaaacttaaaaat
atggttgttgagaacgattcttttgctataaaaataatatctgtagatggtgttgacctt
gaaagtcaacttactacaaggccatcttattatgtggctcttggttccgataacacatgg
tatcttttcacggagaggtgtattaagacggtgtatagagcgggtttccccaatactgct
ttgaataacggtgatgctttacctcgggaaatcatggccgcccatcttgaaaagatggag
atgcagtggcagaagcttagtcacaccgaacttggagctatttggtgtatggaagggtcg
ttagagacatggtcatggagtttaaatgtgccggttttaagcagtctttctgaggataac
gaggttgtgcaatattcgcaagcatactacgatgcagtagaatcttacaagaatcagaga
aacaaagtttctcaattgaagaaaaaaatagctaaaacagaaggctttaaagaatataaa
aaaatagtggatgtggctaggttcaccgaggaaaagatccaacggcttaaagctagatca
aatcgtttaatgactcgtttagagcagattgaaccatctggctggaaggagtttacgcag
gtgagcaatgtgatacatgagataagggctttagatattaatacccatgtgatatttcct
cttggtgaaaccgctgctgctcttcgaggcgaaaacgagctatggattgcaatggttctt
agaaataaaattttgtttaatcttaaaccgccacagttagctgctgtgtgtggaagcatt
gtttctgaaggaatcaaggtgagaccttccaaaaataacagttatatttatgaaccttct
agcaccgttttagaagtaatcaactttctagacgaccagagaagatcgctcttacaactt
caagaaaagcatgatgtaaagataccttgctgtttagatagccagttttctggtatggta
gaagcatgggcatctggtctgacctggagggaaatgatgatggattgtgcaatggatgaa
ggagatttagctcgcttgctacgtagaacgatcgatgtgttggcacagattcccaaattg
cctgatattgaccctcaattacaaagaaacgcaatagctgcatctggtgtgatggatcgt
ccaccaataagtgaacttgcaggatga
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