Helianthus annuus (common sunflower): 110911441
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Entry
110911441 CDS
T05101
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03420
Nucleotide excision repair
han04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110911441
09124 Replication and repair
03420 Nucleotide excision repair
110911441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
han03051
]
110911441
03400 DNA repair and recombination proteins [BR:
han03400
]
110911441
Proteasome [BR:
han03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
110911441
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
110911441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
UBA_7
Dsc3_N
UBA_RAD5A
CUE
Rad60-SLD_2
UBA_3
Ubiquitin_4
TECR_N
Motif
Other DBs
NCBI-GeneID:
110911441
NCBI-ProteinID:
XP_022011753
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Position
15:38211492..38220519
Genome browser
AA seq
386 aa
AA seq
DB search
MKVFVKTLKGTHFEIEVKGEDTVADVKKNIETVQGSDVYPAAQQMLIHQGKVLKDGTTLE
ENKVAENSFIVIMLSKSKVPSGQTSTAATAPKAPQTSAAPPAPAVTQAPPPAVTPPAVVP
SAPAPDSVTISNAPSENVYDQAASNLVAGSNLEGTIQHILDMGGGTWDRDTVVRALRAAF
NNPERAVEYLYSGIPEPAELPPAAGASPVPGVQTVNPPAQAPPATQPAAVPSAGPNANPL
DLFPQGLPDMGANAPAGAAGNLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPHLV
RLIQEHQADFLRLINEPVEGGENVLGDLAAAMPQAVTVTPEEREAIERLEAMGFDRALVL
EVFFACNKNEELAANYLLDHMHEFED
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttttgtgaagacattgaagggcacgcacttcgaaatcgaagtgaaaggtgaa
gatacggtcgctgatgtgaagaaaaatatagaaactgttcaaggatcagatgtttatcct
gctgcacaacaaatgcttattcatcagggtaaagtgcttaaagatggcaccaccttggaa
gagaacaaagttgctgaaaattcttttatcgtcattatgttatctaagagtaaggtaccc
tctggccaaacttcaacagcagcaactgcccctaaggcacctcagacaagtgccgctccc
cctgcaccggctgtcactcaagctcctcctccagctgtgacaccgcctgcagttgttcct
tctgctccagctccagattcagtaactatttcgaacgctccgtcggagaatgtttacgat
caagcagcatcaaatcttgttgctggaagcaatttggagggtacaatccagcatattctc
gatatgggtggtgggacctgggatcgcgatacagtcgttcgtgctcttcgtgctgctttc
aacaatccagaaagagctgtcgagtatttgtattctggtattcctgagccagccgagttg
cctccagctgcgggggcttcaccggtgccaggtgtgcagacggtgaacccccctgctcag
gccccaccagctacacaaccagcagctgtgccttctgctggaccaaatgcaaatccgttg
gatctctttcctcagggtcttcctgacatgggtgcaaatgctcctgccggtgccgctgga
aaccttgattttctccgtaacagtccgcagtttcaagcactacgagctatggtgcaagct
aatccacaaatactgcagccaatgctgcaagagctggggaagcaaaatcctcacttggtg
agactcattcaagagcatcaggctgattttcttcgattgatcaatgagcccgttgaaggc
ggagaaaatgttcttggagatctcgctgcagcaatgccacaggcggtgactgttacaccc
gaggaacgtgaagccattgaacggcttgaagcaatgggattcgatagagcactagtatta
gaggtgtttttcgcgtgcaacaagaacgaagaactggcagccaattacctattagatcac
atgcacgaatttgaagactag
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