Helianthus annuus (common sunflower): 110911524
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Entry
110911524 CDS
T05101
Name
(RefSeq) pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110911524
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110911524
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
110911524
NCBI-ProteinID:
XP_035840432
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Position
15:complement(44120523..44122238)
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AA seq
376 aa
AA seq
DB search
MYKLFCRLLFSGGNSTRRGLQGGCSATNIIDKCWRCKPDWDKDRQALAKCAAGFAKGTTG
GSGGETYIVKDPSDADAANPAPGTLRAGVVQGKPLWITFEKDMVITLTQELVINSDKTID
GRGAKVEITGTGLTLFNVKNVIIHGLNIHDVKEAPGGMIKNSDGPPGKREKTDGDGICIT
GSTKIWIDHCSLSKGVDGLIDVTLKSTDVTISNCKFTNHHKVMLLGADNSHAEDKDMRVN
LAFNVFGEGCDQRMPRCRFGFFQIVNNNYEGWGTYAIGGSAAPTILSQGNRFSAPAEAIK
KNVLVRTDAQEEEWKKWNWRTEKDTLLNGAIFLASGVDPQLTPEQQGGMIAAEPGESVPQ
LTNAAGVLPCVAGQPC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagttattttgtaggcttctattttctggaggaaactcaacaaggagggggctg
cagggtggatgctcagcaactaacataatagacaaatgttggaggtgcaaacccgactgg
gacaaagaccgccaagccttagccaaatgtgcagcgggtttcgcaaaaggaaccactggg
ggctcgggtggtgaaacctatattgtcaaggatcctagtgatgcagacgctgcaaatcca
gcgccagggacgcttcgagctggtgtcgtccaaggcaaacctttgtggatcacctttgag
aaagatatggtaatcacacttacacaagagctggttataaacagcgacaagacgattgat
ggtcgaggtgcaaaagttgagatcacgggtacaggtctcacattattcaatgttaaaaat
gtcatcattcatggattaaacattcatgatgtaaaagaagctcctggtggaatgataaag
aactcggatggtccaccgggtaaaagagaaaagaccgacggtgatggtatatgcattact
ggttcgacaaagatatggatcgaccattgctcccttagtaagggtgtagatgggctcatt
gatgtcacattgaaaagcacagatgtgaccatttccaattgcaagttcactaaccaccat
aaagtaatgctgctcggggcagacaactcgcatgcggaagacaaggatatgagagtcaat
ctagcgtttaatgtatttggcgaaggatgtgaccaaagaatgcctagatgccgatttgga
tttttccaaattgttaacaacaactatgaaggatggggaacgtatgccattggcggtagc
gccgccccaactatccttagccagggcaaccggttctcggctccagccgaagccattaag
aaaaatgtgttggtgaggaccgatgcacaagaggaagagtggaagaagtggaattggaga
acagaaaaagacactcttttaaatggagctatctttttggcatccggggttgaccctcag
ttaaccccggaacaacagggcggcatgattgccgctgaaccaggtgaatctgtacctcaa
ctcaccaatgctgctggtgtactcccgtgtgtggccgggcaaccttgttaa
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