Helianthus annuus (common sunflower): 110911844
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Entry
110911844 CDS
T05101
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03020
RNA polymerase
han03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110911844
09124 Replication and repair
03420 Nucleotide excision repair
110911844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110911844
03400 DNA repair and recombination proteins [BR:
han03400
]
110911844
Enzymes [BR:
han01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110911844
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110911844
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110911844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
110911844
NCBI-ProteinID:
XP_022012183
LinkDB
All DBs
Position
15:69987731..69995217
Genome browser
AA seq
1189 aa
AA seq
DB search
MDLEEEYDQGYDDEEEDITQEDAWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA
DIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS
APLYVDVTKRAIKKGHDGEEVTETQDFGKVFIGKVPIMLRSSYCTLFQNSEKDLTELGEC
PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMF
VRMLARTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMM
ELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYARDILQKEMLPHVGVGEYCE
TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGY
VQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL
SHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAY
PILEFLEEWGTENFEEISPAVIPQATKIFVNGLWVGIHRDPDMLVRTLRRLRRRVDVNTE
VGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQKLQLRETPEDGGWHDLVSN
GFIEYIDTEEEETTMISMTINDLVSARLNPDESYSDTYTHCEIHPSLILGVCASIIPFPD
HNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG
INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA
NTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDDAQGQASRYTRRDHSTSLR
HSENGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT
VEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHRC
GYQMRGFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR
SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAVANLKKNSFECR
GCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDSKKKGA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaagaagagtacgatcaaggatacgacgatgaggaagaagatataactcaa
gaggatgcatgggctgttatcagttcatattttgaagaaaaaggtcttgttcgtcaacag
cttgattcgttcgatgagtttattcagaacactatgcaggaaattgttgacgagtctgca
gatatcgagatccgacccgaatctcagcacaatccgggtcatcaacctgattttgccgag
actatctataaaatcagctttggtcagatttatctgagtaaacccatgatgactgaatca
gacggtgaaaccgccacattgtttccaaaagcagcaaggctaagaaatcttacgtattct
gcaccattgtatgttgatgtaactaaaagggctataaagaaaggccacgatggtgaagaa
gtcacagaaactcaggattttggtaaagttttcatcggaaaggttcctattatgctacgg
tcaagttactgtacactatttcagaattccgaaaaggacttgaccgagcttggagagtgt
ccatatgatcaaggtggatatttcatcatcaatgggagtgaaaaggttctaattgctcaa
gagaaaatgagcaccaatcatgtgtacgtgtttaaaaagagacaaccgaacaaatatgct
tatgtggcagaagttcgttcaatggcagaatctcaaaatcggccacctagtaccatgttt
gtccgcatgcttgctaggaccagtgcgaaagggggttcgtcaggtcaatatatccgtgct
acacttccatatattcgaactgagattccaatcattattgtatttcgagcactggggttt
gttgctgacaaggatatattagaacacatatgttatgattttgccgatactcaaatgatg
gagttgctgcgtccttcattggaagaagcatttgttatacaaaatcagcaagtggcctta
gattacattggaaaaagaggtgctactgttggtgtcaccaaagaaaagagaataaagtac
gcccgtgatattcttcaaaaagaaatgcttcctcatgtgggggttggagagtattgtgaa
acaaaaaaggcatactattttggatacattatccaccgacttttattatgcgctcttgga
cggagggctgaggatgatcgggaccactatggaaacaagaggcttgatcttgcgggtcca
ttgcttggtggcctttttagaatgctctttcgtaagttaacaagagatgtaagaggatat
gtacaaaagtgtgtagacaatgggaaggatgttaatctgcaatttgcaattaaagcaaaa
acgatcactagtggtcttaaatattctcttgctaccgggaattgggggcaagcgaatgca
gcaggaacaagggctggtgtttcacaggtgttgaatcgtttgacatatgcttctacttta
tcacatttaagaagactaaactctcctataggacgtgaaggaaaattggcaaaaccaaga
cagctgcacaactcacaatggggaatgatgtgtccagcagaaacccctgaaggacaggca
tgtgggctggtgaaaaaccttgcattgatggtttacataactgtcgggtcagctgcatac
ccaattttggaatttttagaagaatggggtacagagaatttcgaggaaatatctcctgct
gtcatcccacaagctacaaaaatctttgtcaatggtctatgggtgggaattcatcgtgat
cccgacatgttggttagaaccttgaggagattaagaagacgagttgatgtaaacactgaa
gttggcgttgttcgagatattcgtttgaaagaacttcgaatttataccgattatggccgt
tgcagtcgtccacttttcattgttgagaagcaaagacttctaataaaaaagaaagacatc
caaaagctgcaactaagggaaaccccggaagatggtggctggcatgatcttgtgtcaaac
ggatttattgaatatattgataccgaagaagaagagactactatgatttccatgaccatt
aatgatcttgtaagcgcgaggctaaatccagatgaatcttattcggatacttatacccat
tgtgaaatccatccgtcgttaattttgggtgtttgtgcatccattataccatttcctgat
cacaaccagtctccacgtaatacataccagtcagctatgggaaaacaagctatggggatt
tacgtcaccaacttccaattccgtatggatacattggcgtacgttctctactatcctcag
aaaccactcgtgactactcgagcaatggagcacttgcacttcagacaacttccagctggc
attaatgccattgtggcgatttcctgttattctggttataaccaagaagattcggttatt
atgaaccaatcatcaatagatcgtggtttcttcagatcactttttttccgctcatacaga
gatgaagaaaagaagatgggaacacttgtgaaagaagattttggtcgacccgatagagct
aataccatgggtatgaggcatggttcatatgataagttggatgatgacggtctagcccct
cctggaactcgagttggaggtgaagatgtgattattggaaaaacgacacctattgcacaa
gatgatgctcaaggtcaggcctcacgttatactcgtcgtgatcacagcacaagcttacgt
cacagtgaaaatggaatggttgatcaggtactgcttactacaaatgctgacgggttacgg
tttgtgaaagtaagggtgagatctgttagaataccccaaattggagataagtttagtagt
aggcatggtcaaaagggaaccgtgggtatgacttacacccaagaagacatgccgtggact
gttgaaggcatcactcctgatattatagtcaacccgcatgctatcccgtctcgtatgacc
atcggtcaacttattgagtgtatcatggggaaagttgctgcacatatgggcaaagaagga
gatgctacccccttcacagacgttactgtggataatatcagtaaggcgcttcacaggtgt
ggttaccagatgcgtgggtttgagaccatgtacaacggtcatacaggtcggcgacttccg
gctatgatattccttgggccaacttactaccaaaggttaaaacatatggtggatgacaag
attcactcacgtggacgaggtccagttcagattttgactaggcagccggctgagggacgg
tcacgtgacggtgggttgcgatttggggagatggaacgagactgtatgattgctcatggt
gctgctcattttcttaaagaacgactgtttgaccagagtgatgcatacagggttcatgtt
tgtgaacgctgtggcttgatcgctgttgctaaccttaaaaagaattccttcgaatgtaga
ggctgcaagaacaaaactgatatcgttcaggttcatattccatacgcgtgtaaactgctt
ttccaggagcttatgtcaatggcgatcgcacctagaatgcttactaaagatattaaacaa
gcaaaagatagcaagaagaaaggcgcttga
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integrated database retrieval system
