Helianthus annuus (common sunflower): 110911856
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Entry
110911856 CDS
T05101
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
han01009
]
110911856
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110911856
Enzymes [BR:
han01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110911856
Protein phosphatases and associated proteins [BR:
han01009
]
HAD phosphatases
Fcp/Scp phosphatases
110911856
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110911856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
110911856
NCBI-ProteinID:
XP_022012196
LinkDB
All DBs
Position
15:complement(70205799..70214714)
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AA seq
941 aa
AA seq
DB search
MYKSVVAVYDGEKFIGDVEACFDYDLMNKNANLKDKIRISYYSTPSERCSPLAVLYTIST
PPSRVCLKLESNNVNVNSQLSLLHATCLGENKTAVVSLGGDELHLVAMRSRRNDLFPCFW
GFIIAPGLYESCLVMLNLRCLGIVFDLDETLIVANTLRSFEDRIESLQRRLSCEADPARI
AGMLSEIKRYQDDRNILKQYAESDQVVENGKLIKAESEVVPALSDNHQTVVRPLIRLREK
NIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLD
PDSNLITIKELSNRIVCVKSGLKKSLFNVFQDGNCHPKMALVIDDRLKVWDERDQPRVHV
VPAFAPYYAPQAEANSAVPILCVARNVACSVRGGFFKDFDDSLLQRINEVAYEDEIKDIL
PPDVSNYLVSEDDASALNGNKEPLGFDGMADAEVERRLKEAIASSTIAPVMPKLETVLKT
AFQYNSTPAPPASTPIVPPGPIVQCANKQLLSVLEPLTQVSHQETSLHSSPAREEGEVPE
SELDPDTRRRLLILQHGMDMREPATSEPPQFPVRPPPMQVLAPRVEPHGGWIPLGEDMGP
RQFNRIAPSPKEFSLHSEQPMHIDKKHSFRAPPFGQKVEASILPDRVVENMRPPKEVLQR
DDRLRLSHSPPVHPLFQGEESSLRHSSSSNGNMDNETGGNDTFAESPAEYLHYIAFKCGT
KAEFRLALVPGIKLQFSVEVWFAGEKIGDGTGSTRREAQHHAAESSLMNLADKYLACLKP
GDEGGLINDGSPFRHPSLLREESTSLPSASVPAKLEIPKKSSIDALNELCTIEGLHMTFQ
PQPQVLTGMGVNNELYTQVEIDGDVWGKGVGMTLDEAKMQAAEAAFQNLKAKIGQFPKKR
QLSSRSFQGMPTKRFRPEDPRVMQRMAASARYPKHNASLVP
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatcggtggtggcggtttacgatggggaaaagtttatcggtgatgtggaggcg
tgttttgattatgatttgatgaataagaatgcgaatttgaaggataaaatcaggatttcg
tattattcaacaccgagtgagagatgttcgccacttgctgttctgtacacaatcagtaca
ccaccgtctagggtttgcttgaaactggagtccaacaatgtcaacgtgaactcgcaattg
agtcttttgcacgctacgtgtctcggagaaaacaagactgctgttgtctcacttggtgga
gatgaactgcacttggtggcaatgcgttctagaagaaacgacttatttccatgtttttgg
ggatttatcattgcgccagggctttatgagtcatgcttagttatgctgaacctaagatgt
ttgggcatcgtatttgaccttgacgagactctcatagtagccaatactttgaggtcattt
gaggatcgaattgaatccttacaaaggagactaagctgtgaagctgacccggcacgtatt
gctggtatgctttccgagattaaacgatatcaagacgatagaaatatcttaaaacaatat
gccgaaagtgatcaagttgttgaaaatggcaagttaatcaaagcagagtctgaggttgtc
cctgctttatcagacaatcatcaaactgttgttcgcccacttataagattgcgagagaag
aacatcatcctcacccgtatcaacccactgattcgtgatacaagtgttcttgtgcgattg
agacctgcatgggaagatcttagaagctacttgattgcaagaggacgaaagcgttttgag
gtttatgtttgtacaatggctgaaagagattatgctttggaaatgtggaggcttctcgat
ccagattcaaatttaataaccataaaagagttgtcgaaccgtatcgtgtgtgtgaaatcc
gggttgaagaaatcactctttaatgtttttcaagatgggaactgccatcccaaaatggca
ttagttatagatgatcgtttgaaagtgtgggatgagagagatcaacctcgtgttcacgtc
gttcctgcttttgctccatattatgctcctcaagctgaagcaaacagtgctgttcctatc
ctttgtgttgctagaaatgttgcttgcagtgtcagaggtggttttttcaaggactttgat
gatagccttctgcaacgaatcaatgaagtcgcatatgaagatgaaataaaagatattttg
cctccagacgtcagcaactatttggtttctgaggatgatgcttctgctttaaatgggaac
aaagaaccacttggttttgatgggatggccgatgctgaagtagaaagaaggttaaaggag
gctatagcttcatcaaccattgctccagtgatgcctaagcttgaaactgtacttaaaaca
gctttccagtacaattctacacctgcaccacctgcatcaacgcctattgtgccaccaggg
ccaatcgtccaatgcgctaacaagcagctgctatctgtacttgaaccattaactcaagtg
agccatcaagaaacaagtttgcatagttctcctgcaagggaagaaggtgaggtgccagaa
tctgaactcgaccccgatacaagacgcaggctcctcattttacaacatggtatggatatg
agagaaccagccaccagtgaaccaccacagtttcctgtaagaccacctccaatgcaagtt
ttagctcctcgggtcgagccacatggcgggtggattccattgggtgaagacatgggtcca
agacagtttaatcgaatagcaccatctcctaaagaattttctttgcattctgaacaacct
atgcatattgacaaaaaacactcttttcgtgcaccaccctttggtcaaaaggtggaagct
tctatactgcctgatagagttgttgaaaatatgaggccacctaaggaggtccttcaaaga
gacgataggttgaggttaagccattcacctcctgttcaccccttgttccaaggggaggaa
agctccttgcggcattcatcatcaagcaatgggaatatggataatgaaaccggcggcaat
gatacgtttgctgaatctcctgctgaatatctacattatattgcttttaagtgtggaacc
aaggctgagttcaggttggctctggtccctggcatcaaactgcagttctctgttgaggta
tggttcgctggagagaaaatcggtgatggaactgggagcacgcgtagggaagctcaacac
catgctgccgagtcatctcttatgaatttggcagataagtatttagcgtgtctaaaacct
ggagatgagggggggcttataaatgatgggagtccttttagacatccgtctttgctaagg
gaggaatctacttcacttccaagtgcatcagtaccagcaaagctagagattcccaagaaa
agctcaattgatgcacttaatgaactatgcacgattgagggtttgcacatgacttttcaa
cctcagcctcaagttttaactggtatgggtgtgaacaatgaactatatacacaggttgaa
atagatggggatgtgtggggtaagggagttgggatgacattggatgaagctaagatgcag
gctgcggaagctgcttttcaaaatctgaaagcaaagattggccaattccctaaaaaacgt
caactttcttctagatcatttcaaggaatgccaacgaaacggtttcgaccagaggaccca
agagttatgcaaagaatggcagcatcagcaagataccccaagcacaacgcctctctcgtt
ccttga
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