Helianthus annuus (common sunflower): 110911890
Help
Entry
110911890 CDS
T05101
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110911890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110911890
Spliceosome [BR:
han03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110911890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
110911890
NCBI-ProteinID:
XP_022012232
LinkDB
All DBs
Position
15:75431044..75436011
Genome browser
AA seq
798 aa
AA seq
DB search
MERSSRKHRDSDRTSKHADDHHRSKHRETDGDDRRRRSERERSEEIENRVKREKSYDRET
SKERESREKSVDNRRHHKRKDRGDSEDEDRYYDVRDKRVRVSDERKERRRFEVKVAAAED
ERDREERKERRRFEDSVKKEEVEVGDLRKRSVKVEDEDESVGVSGANGGAPRLRNKALGT
PHETPSVPEHHIPKVSLISTKTENEGVNSNRSHEVPGKSSTDGNSLDAGKSGGISLDALS
KAKATLLKRKELAEKMKKIPLLNKSVDSKDSMKVPATSQPLSTSAHTLLSGSTASTQPLV
SGVPQLAGLSAPKFEAVKRAQELAAKMGFRQDPEFAPLLNMFPGQMPPEVVLQPKPAKAP
VLRLDALGREVDEHGNVVNIPKANNLSTLKVNINKQKKDAFQILKPELEVDPEKNPHFDP
RMGIDKTKLLRPKKMTFQFVEEGKWAKEAEIIKLKSQFGEAQAREFKAKQAQLAKAKAEP
DINPNLIEVAQRVSTKEKPKDPIPDVEWWDVPLLNSGTYGNITEGGLPEDILKKEKITLY
VEHPRPIEPPAEPAPPPPQPLKLTQKERKKLRTQRRLATEKNRQEMIRQGLLEPPKPKVK
MSNLMRVLGAEATQDPTRLEMEIRSAAAEREQAHVDRNIARKLTPAERREKKERKLFDDN
NTLETIVSVYKVNDLSHPQTRFKVDVNAQENRLSGCAVISEGICVVVVEGGSKSIKRYQK
LMLKRINWADAVKEEDEDDNDEKPKNKCVLVWQGSVAKPSFHRFLVHECITENAARKVFS
DAGVGHYWDLSVNFTDEA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggaacgatccagccggaaacacagggattccgatcgaaccagcaaacacgccgacgat
caccaccgctccaaacaccgcgaaaccgacggcgacgaccgtcgtcgccgatccgaacgc
gaacgatctgaagaaatcgaaaaccgcgtgaagcgcgagaaatcatacgatcgagaaacc
agcaaggagagagaatcgcgagagaaatcagtggataacaggcggcatcacaagcggaaa
gaccgtggagatagtgaggatgaagatcggtattatgatgttcgagataagcgagttagg
gtttcggatgagcggaaggagaggcggaggtttgaggtgaaagttgctgctgctgaggat
gagagagatagggaggagaggaaggagaggaggaggtttgaggatagtgtgaagaaggag
gaggtggaggttggtgacttgaggaagcggagtgtcaaggtggaggatgaagatgagtcg
gttggtgtttccggtgctaatggtggtgcaccgagattgcgcaataaggcacttggaacc
ccacatgagaccccttcggtgcctgaacaccatatacctaaggtatctttgatttctacc
aaaactgaaaatgaaggagttaatagtaacagatctcatgaggttcctgggaaatccagt
acagatggaaattctttagatgctggcaagagtggtggcatttctctcgatgccttatct
aaggctaaagcaactttactcaagcgaaaggaacttgccgaaaagatgaagaaaatcccg
ttgttgaacaaaagcgttgactcaaaagacagtatgaaagttcctgcaacttcccaacct
ttaagcacaagtgcacatactttgctttctggttccactgcttctacgcagccacttgtt
agtggggtgcctcaacttgcagggcttagtgcacccaagtttgaagctgtaaaacgcgca
caagagcttgctgccaagatgggatttagacaggatccggagtttgctccacttctaaac
atgtttcctggacagatgccgcccgaggtggtacttcaaccgaagcccgctaaggctccc
gttcttcgtttggatgcattgggaagggaagtagatgagcacgggaatgtggtgaatata
ccaaaagcaaacaacttgagcactcttaaggttaacatcaacaagcagaaaaaagatgca
ttccagattctaaaacccgaattagaagttgacccagaaaaaaaccctcacttcgatcct
cgaatgggcatagacaaaactaagctgttaaggcctaaaaagatgacatttcagtttgtg
gaggaaggtaaatgggctaaggaagcagagatcattaagttaaagagtcaatttggagaa
gcacaagcaagagagttcaaagcaaagcaagcacagcttgctaaggccaaggctgaaccg
gatattaatcccaatcttatagaggttgcgcagagagttagcactaaagaaaagccaaag
gacccgattcccgatgttgagtggtgggacgtaccacttttgaattctggtacttatggg
aacattacagaaggtgggttaccagaagacatactaaagaaagaaaagatcaccttatat
gtggaacaccctcgtcctatcgaaccaccagccgaacccgctccacccccacctcaaccg
ttaaaactcactcaaaaagaacgcaaaaagctgcgcactcagaggcgtcttgctactgag
aaaaaccgtcaagaaatgatcagacaaggccttctagaaccccctaaaccgaaagtcaaa
atgagcaatttaatgagagttcttggcgcagaagcaacccaagacccgacccggctggaa
atggagataagaagtgctgcagccgaacgtgagcaagcgcatgttgacagaaacattgca
cggaagctgactccagccgagaggcgtgaaaagaaagagaggaaacttttcgatgacaat
aatacccttgagacgatcgtttctgtgtacaaagttaacgacctttctcaccctcagaca
cggtttaaagttgatgttaacgcccaagagaaccggctgtctggctgtgcggttatctca
gagggtatttgtgttgtggtggtggaaggcggtagtaaatccataaaacgctatcagaaa
ctgatgctgaaacgtataaactgggctgatgctgtgaaagaagaggatgaagatgataat
gatgagaaaccgaagaacaaatgcgtgttggtgtggcaagggagtgttgcaaaaccaagt
tttcataggtttctggtgcatgagtgcataactgaaaatgctgctcgcaaggtgttctct
gatgctggagtaggtcattattgggatttatccgttaacttcacagacgaggcgtga
DBGET
integrated database retrieval system
