KEGG   Helianthus annuus (common sunflower): 110912021
Entry
110912021         CDS       T05101                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110912021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:han03021]
    110912021
Enzymes [BR:han01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     110912021
Transcription machinery [BR:han03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     110912021
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 110912021
NCBI-ProteinID: XP_022012378
LinkDB
Position
15:complement(98905354..98914150)
AA seq 1200 aa
MEEAGPSNKEKPSNGSAHLDLNDDEDDDDDMMDVPSVRDFDELTLKNFTKRASTAFFKHY
GLISHQINSYDDFIKVGIQKVFDSLGEIIVEPGYDPSKKGDEWRFASVKFGKVTNERPRF
WTGEKFSADSGKDYLEFLPRHARLQNMTYSSRLKVHISKQVYTQELVRSDKFKTGQEKIL
DKKVIDTEEREVYIGRIPVMINSDSCWMSGADKDDCDYDQGGYFIVKGAEKTFIAQEQLG
SDRIWVSGTPNWRVTYRSVHKRKRVYVKLTDTPNNIEDIVGGAQVINVYTLSLEDMPIWI
LFFALGVSSDKEVVDLIDADITDGNIVNILIASIHAADETCDGFRKGRNALEFVDKLLKK
SSFPPKESVEECIENYLFPNIIGFSRKARYLGYMVKCLLEGYAGQRKVDNKDDFRNKRLE
LAGELIERELNIHLRHAVKRMVKSLQRDLYPDRVVHPIEQYFDSAIITNGLSRAFSTGTW
SHPLKYMEKTSGVVAMLRRANPLQMISDMRRTRQQVLYAGKAGDARYPHPSHWGKICYLS
TPDGENCGLIKNLAATALVSTTVREDLSDALLACGMEKLVDDTSTSLSGMDKIFVNGDWV
GTCKDSASFVAEFRSKRRRKQVPHQVEIKRDAKHKEVRIFCDAGRILRPLLVVKNLHKIK
LLKGGGYSFQDLLDNGVVELIGTEEEEDCCTAWDIKYLFLENDDHNPGKYTHCELDMSFM
LGLSCGIIPFANHDHAKRVLFQSQKHSQQAIGYSSTNPDIRADTLSHQLFYPQRPLFKTV
LSDCLEKSQPFGQSQKGMIPRPEFYNGQCAIVAVNVHLGYNQEDSLVMNRACLDRGMFRS
EHTRSYKAEVENKEALGKKPKSDDAINFGKIQSKIGRVDSLDDDGFPFVGANLQSGDIVI
GKFTEAGTDHSVKLKHTERGMVQKVVLSANDEGMNFAEVSLRQVRSPCLGDKFSSMHGQK
GVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQMLESALAKGIALGGSQRYATPF
SSLSVDAITDQLHRAGYSRWGNERLYDGRTGEMVKSLVFIGPTFYQRLVHMSEDKVKFRN
TGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDCSEMHVCRRCK
RMASVIQRSVPGGHKIRGPYCRICDSMEDVIKVSVPYGAKLLSQELFSMGISLKFDTELC
NT seq 3603 nt   +upstreamnt  +downstreamnt
atggaagaagcgggaccgagtaacaaggagaagccttcaaatggatcagcgcatctcgac
ttaaacgatgacgaagacgatgacgatgatatgatggacgtgccatcagttagggatttc
gatgaactgactttgaagaactttactaaacgagcatcaacagcatttttcaaacattat
ggtcttataagtcatcagattaactcatatgatgacttcatcaaagtaggaattcagaag
gttttcgactcgcttggtgagattatcgttgagccagggtatgatccctcgaagaagggt
gatgaatggaggtttgcttcggttaaattcgggaaggttactaacgagcgccctaggttt
tggacaggcgaaaagttttcagctgatagtggtaaagattacctcgagttcttgcccaga
catgcccgtcttcagaatatgacttactcatccagattgaaagttcacatctcaaaacag
gtttatactcaagagcttgttagaagtgataagttcaaaactggacaagagaagattctg
gacaagaaagtcatagataccgaggagcgagaagtttatattgggaggattccggtgatg
attaattctgactcgtgctggatgagtggagccgacaaagatgactgtgattatgaccaa
ggtggctatttcatagtcaaaggagccgagaagactttcattgcacaagagcagcttggg
tctgatagaatctgggtgtcgggcactccaaactggcgtgtgacataccgttcggttcac
aagagaaaaagagtttacgtgaaactgacagacactcctaataacattgaagatattgta
ggtggagctcaagtgataaacgtatatacgttaagcttagaagatatgcccatatggatt
ctctttttcgcccttggcgtatcctcagataaagaagtggttgacctgatcgatgctgac
atcacggatggaaacattgtcaatatattaatcgcttccattcacgctgctgatgagact
tgtgacggattccgtaaaggacgaaacgccctagaatttgttgataaacttcttaaaaaa
agcagctttcctcctaaagagtcggttgaagaatgcatcgagaattacttgtttccgaat
atcatcggctttagtagaaaagctcggtatcttgggtacatggtgaaatgtcttctagaa
ggttacgcaggtcaaagaaaagtcgacaataaagacgattttagaaacaaaaggttggaa
ttagccggtgagttgattgagagagagctaaacattcatcttcgacacgctgtgaagcga
atggtgaagtcgttgcaacgggatctttatccagatcgagtcgtacatccaatcgagcag
tattttgattctgcgattattacaaacgggctttcgcgcgctttttcaacgggtacatgg
tcgcatccgttaaaatacatggagaagacttcgggcgttgtggcaatgcttcggagggca
aatcctttgcaaatgatttccgatatgagaagaacacgtcagcaggttttgtacgccggg
aaagctggagatgcaagatacccacacccgtctcactggggaaagatatgttatctttcg
acccctgacggtgaaaattgcgggttgataaagaatctggctgcgactgctctcgtgtca
accactgttcgggaagatctttcagatgcgctgttagcttgtggtatggaaaaactggtg
gatgatacttcaacgtcactctccggaatggacaaaattttcgtgaacggtgattgggtc
gggacttgcaaagattccgcttcgtttgtagctgagttccggagcaagcgtcgtagaaaa
caagtacctcatcaggttgaaataaaaagagatgctaaacataaagaagtgaggatattt
tgtgatgctggaaggatcttgcgaccacttttagttgtcaaaaacttgcacaaaatcaaa
cttctgaaaggtggaggttactcgttccaagatcttctagataacggagtcgtcgaacta
atcggaaccgaagaggaagaagattgctgcaccgcatgggacatcaagtatctttttttg
gaaaatgacgatcataaccctggaaaatacacacattgtgaactcgacatgtcgtttatg
ttaggtttaagctgcggcatcatcccattcgctaatcatgatcatgccaagagggtcctt
tttcaatcgcaaaaacacagtcagcaagcgatcgggtactcaagcacaaatcccgatatc
cgagccgacactctttcacatcagctgttttatccacagaggcctcttttcaaaaccgtg
ctttccgactgtcttgaaaaaagtcaaccttttggtcaaagtcaaaagggtatgatcccg
agacccgaattctacaacggacagtgtgccattgtggcggtgaatgtgcatctagggtac
aaccaagaggactcgttggttatgaaccgtgcttgtttagaccgcgggatgtttcggtcg
gaacatactagaagctataaagcagaagtggagaataaggaagcgttagggaagaaaccg
aagtctgacgatgctatcaacttcgggaagatacaaagtaagatcggacgggtcgacagt
ctggacgatgacgggtttccgtttgtcggtgctaatttgcagagcggtgatatagtgatc
gggaaatttaccgaagcgggaacggatcatagcgtgaagttgaagcacactgaaagagga
atggttcaaaaggttgtactatcagcaaatgatgaaggaatgaactttgctgaggtatct
ctgagacaggttcgttcgccgtgcctcggtgacaagttttcgagtatgcacgggcaaaag
ggtgttttgggttatttggaatctcaagaaaatttcccgttcacggtacaaggaatagtt
ccggatattgttataaacccgcatgctttcccgtcaagacaaactcctggacagatgttg
gagtccgcactggcaaaggggattgcgttaggtggttcacaaagatacgccactccgttt
tcttctctctctgttgatgccataaccgaccagcttcacagggccgggtattcaagatgg
ggaaacgagaggctatacgacgggcggactggtgaaatggtgaaatctctcgttttcata
ggaccaacattctaccaaaggctggtccacatgtctgaagacaaagtgaagtttcgaaac
acgggcccggtacaccctctcacccgacaaccagtggcagacaggaaacgtttcggtggg
atcaaattcggtgagatggagcgcgactgtctcatagcccatggagcgtcggctaacctt
catgagcgtcttttcactctcagtgactgctcagaaatgcatgtctgcagaaggtgcaag
agaatggcgagtgtgatccagaggtcggtcccgggtgggcataagatccgtgggccatat
tgtcggatatgtgactctatggaagacgtgatcaaggtaagcgtgccgtatggtgcaaag
ttactgtctcaagagctctttagtatggggatctctcttaagtttgacactgaactatgc
taa

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