Helianthus annuus (common sunflower): 110912213
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Entry
110912213 CDS
T05101
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03440
Homologous recombination
han03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110912213
03460 Fanconi anemia pathway
110912213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110912213
03036 Chromosome and associated proteins [BR:
han03036
]
110912213
03400 DNA repair and recombination proteins [BR:
han03400
]
110912213
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110912213
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
110912213
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
110912213
FA (Fanconi anemia) pathway
Downstream FA components
110912213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
110912213
NCBI-ProteinID:
XP_022012584
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Position
15:complement(115075698..115084746)
Genome browser
AA seq
1118 aa
AA seq
DB search
MSTWQVFSDAGNNFKWQRSHSKLSTEPQKPPIEKPNPNHHLPSIADLLLQAGYANLCEKP
GVEVETSPTFRTGSGKPVVVKQSSLVKASCILGDQDTGANADTEYLKVEDNSNGVSTPFT
FRTGSGKHVDVKQSSMAKALSMFGGQDDDNDAFVDTGCFKVGEDKNDKVETPLTFQTGLG
KSVAARKSSFEKAFAILGDLDEETFSDCTVGPDNGIGCMFKTGSGKAVNICSAGLVKART
LLGLEENSLLDNTSKGLEQSTSATAGTNLGFPEARRPSPAIKFQTAGGRSIKVSGHALKQ
ARSLLGDPDLGNFFKEGNAIFSSDMNKENNVNTSFSDYIPKGKSKAKQMSNNFISPLRSV
SFDNKTTVRSEDIGLKNNLIREFDAVGRDIKQYNDNTLGGPKSLNRPLVDISNTLGAENQ
QVTGEKRKLSSRKYPSPFKKPRNSKFIPPLNKNSALVSTGTMPKISEGSCCKTRVSTRYP
FQFTRKYIKEYLGEPPFLHNGFENVPEWLRKINSENADKHMFEDESGLKCIGLDSFFHML
AQSRCSILSKEWVANHYRWIVWKLACYERCYSAKFYGKLLTASNVLEELKYRYEREVNNA
HRSALKRILEGDAPASSPLVLCIASIKFKCNSEPDIEPSNATESSSIELTDGWYSIKALL
DELLLKQLFSGKLFVGQKLRICGASLSGWNAPVSPLEASRMISLCLHINGTYRANWADRL
GFCKSGCAPLAFKCIKGSGGVVPNTLVGVTRIYPVLYRERLSDGVFVVRSERMESKRMQL
YDQRRSSIMEGVMAEFQSGLKGFQIDDDEGEKISKLLEQAAEPEVIMADMSLEQLTSFAT
YQAKIEASRQSEIDKLIEKALEEAGLSRREVNTLMRVRVVGLTSQSYIPKSRPQQGLITI
WNPTEKQQSELVEGQAYAVAGLTPINSDTGTIYLRARGSTTQWRPLSPLAIQHFQPFYTP
RKAVSLLRMGEVPLSSEFDVAAFVIYVGVVHKSSQQKRQWVFVADGSIISSQPHELSDAL
LAISFCSPSVDCDSIVPINYNLVGSTVGFCNLIKGAKDQTNHIWVAEATDNSTYFLSYDG
ANSKHLKDAAASADQWAKASTLTIEKLKEKVSSIVAGK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgtggcaagtcttctctgacgccggaaacaatttcaagtggcaacgttctcac
tctaaactctcaactgaaccacaaaaacctccaattgaaaaacctaaccctaatcaccat
cttccttctattgccgatcttttacttcaagcaggatatgcaaacctatgtgagaaacca
ggtgttgaagttgagacttctccgacgttcagaactggatcggggaaaccggttgttgtg
aagcagtcttccttggtgaaagcgtcgtgtattcttggagatcaagacactggagctaat
gcagatacagagtatttgaaagtagaggataattcaaatggagttagcacgcctttcaca
tttcggaccggatcagggaaacatgttgatgttaagcagtcatccatggcaaaagcacta
tctatgtttggaggtcaagatgatgacaacgatgcctttgtagatacaggatgctttaag
gtaggtgaagataagaatgataaggtcgagactcctttgacatttcaaactggattgggg
aaatcggttgcagcaagaaagtcttcctttgaaaaggcattcgctattcttggagaccta
gacgaagagactttttcagattgcacagtcggtccagataatggaatcggatgcatgttc
aaaacagggtcagggaaagccgtaaacatatgttctgcaggtctcgttaaagccagaaca
ctgttaggattggaagaaaattctcttcttgataacacttccaaaggcctcgaacaatca
acaagtgcaactgctggaacgaatttagggtttccagaagctagaagaccatcaccagct
attaagtttcaaacagctggcggaagatctataaaagtttccggtcatgcattgaaacaa
gcgaggagcctgttaggagatcctgatttggggaatttctttaaggaagggaacgctata
ttttcatcggatatgaacaaagaaaataatgtgaatacatcttttagtgattatatacca
aaaggaaaatctaaagcaaagcaaatgtctaataactttatatcaccgttaagatcagtt
tcatttgataataagactacagtaagatcagaagatataggtctgaaaaataatttgatc
agagaatttgatgcagtgggacgtgatatcaagcagtataatgataatactttaggtggg
ccaaagtctttgaataggccattggtagatatttcaaatactttgggtgctgaaaatcaa
caagtcacaggagaaaagaggaagctatcaagtcggaagtatccttctccattcaagaag
ccacgaaattccaaatttatccctccgttaaacaaaaattcagcactagtttctaccggt
acgatgcccaaaatctctgaaggatcatgctgcaaaacaagggtttccactcgataccct
ttccagtttactcgcaagtacatcaaggagtatcttggagagcctccttttcttcataat
gggtttgagaacgtccctgaatggttaagaaagataaactcagagaacgcggacaaacac
atgttcgaggatgaatctggtctaaaatgcattggtttggattctttctttcacatgttg
gctcagtcaagatgttcaattctttcaaaagagtgggttgcaaatcactacagatggata
gtctggaaacttgcatgctatgagagatgctattctgccaaattttatgggaaacttttg
actgcttctaatgtgcttgaggaactgaaatacagatacgagagagaagttaacaatgct
caccgatcagctctgaagagaattctagaaggagatgcccccgcttcttctcctttggta
ctttgcattgcatctataaagttcaagtgtaattcagaaccagatatagagccatcaaat
gccactgaaagttcaagcatagaactcacagatggatggtactcgataaaagccctgttg
gatgaattacttttaaagcaactcttttccggaaaattgtttgtgggacaaaaacttagg
atatgtggagctagtttatctggttggaatgcacctgtttcaccccttgaggcatcgagg
atgattagcttatgcttgcacatcaatgggacatatagagctaattgggctgaccgtttg
ggattctgtaaaagtgggtgtgctccgttagcatttaagtgcattaaaggttctggaggg
gtagttcccaacacattagttggagtcactcggatataccctgttctatacagggagagg
ttaagtgatggagtttttgtggtgagatcagagaggatggaaagcaaaaggatgcaattg
tatgaccagagacgttcaagcatcatggagggggttatggctgagtttcagtcagggctt
aaaggattccaaattgacgacgatgaaggagagaagatttcaaagctactagaacaagct
gctgaaccagaagttattatggctgacatgagtttagagcagctcacgtcatttgctact
tatcaagcaaaaattgaggcgagtagacagtcagagatagataaattaattgaaaaggca
ttggaggaagctggactaagtaggagggaagtcaacactctcatgagggtgagagtagtt
gggttgactagtcaaagctatattccgaagagccgcccacagcagggattgataacaata
tggaacccgactgagaaacagcaatcagagttggttgaagggcaagcatatgctgttgca
ggcctcacaccaattaactctgatacaggcactatttatttgcgtgctagaggctctaca
acccaatggcgcccattatctcccttggcaattcaacattttcagcctttttatactcct
cggaaagcggtatcattattacgaatgggtgaagttccactctctagtgaatttgatgtt
gctgcgtttgttatatacgtgggggtggtgcataaatcttctcagcagaaaaggcaatgg
gtttttgtggctgatggcagtattatttcatcacaaccacacgagctgtcagacgctttg
cttgccataagcttctgttcaccatctgtcgactgtgattccattgtaccaatcaactac
aatcttgtaggatcaacggttgggttttgtaatctcataaagggtgccaaggatcaaacg
aatcatatatgggtggctgaagcaaccgacaactcgacatactttctaagttatgacggt
gccaattccaagcacttgaaggatgcagctgcttctgctgatcaatgggcgaaagcctca
accttgacgattgagaagttaaaggagaaagtgtcatctattgttgccggaaagtag
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integrated database retrieval system
