Helianthus annuus (common sunflower): 110912351
Help
Entry
110912351 CDS
T05101
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04120
Ubiquitin mediated proteolysis
han04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110912351
04120 Ubiquitin mediated proteolysis
110912351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110912351
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110912351
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
U-box type E3
110912351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
110912351
NCBI-ProteinID:
XP_022012740
LinkDB
All DBs
Position
15:complement(121147061..121151818)
Genome browser
AA seq
1004 aa
AA seq
DB search
MATTTTPKPQRSPEEIEDIILRKIFLVSLTDSMTNDSRIVYLQITAAEILSEGGDLKLSR
DLIERVLVDRLSGNSASAEPPFQYLIGIYRRACEEQKKIVNMKDKLVRAQMETVVNQAKK
LSVSYCRIHLSNPDMFPDNDRTRSNVSPLLPLVFGEVSSSIDTFGGGSVGACPGFIDELF
KDTDYESVEPILKQLYEDLRGIVLKCSALGNFQQPLRALMYLISFPVGARALVNHPWWIP
KGAYLNGRVIEMTSILGPFFHVSALPDQSVFKGQPDVGEQCFSESLTRRPADLLSSFTTI
KTVMNNLYDGLAEVLRSLLKNTSTRENVLQYIAEVINKNASRAHIQVDPLSSASSGMFVN
LSAVMLRLCEPFLDANSTKKDKIDPKYVFYGSRLEFKELTALHASSEEVTEWLNKNNPST
SSSGESSSYSFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDNLATLKTMQEQSPL
PRLAQDIARLEKEIESFTQEKLCYEAQILRDGGLLQQALSFYQLMVVWLVGRIGGFKMPL
PQSCPMEFACMPEHFVEDAMELLIFASRIPRALDGVKLDDFMNFIIMFMASPEYIRNPYL
RAKMVEVLNCWMPRRSDTSSATSTLFEGHQLSVQYLVRNLLKLYIDIEFTGSHTQFYDKF
NIRHNIAELLEYLWQVPVHQNAWKQIAKEEEKGVYLNFLNFLINDSIFLLDESLNKILEL
KELEAEMSNTVEWEQRPAQERQERTRLFHSQENIIRIDMKLAMEDVSMLAFSTEQITAPF
LLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKELLKQIVNIYVHLARGDHE
NIFPSAITKDGRSYNDQLFTEAANVLRRIGEDPRIIQAFDDLGRKAKAAASEAMDAEAIL
GDIPDEFLDPIQYTLMKDPVILPSSRIIVDRPVIQRHLLSDATDPFNRSHLTPDMLIPDT
ELKQKIEEFVKSQQRKQHGEEMSMQSSSFKSSIQSPDGTGPLID
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaccaccacccccaaaccccaacgatcaccagaagaaatcgaagacataatc
ctccgcaaaatcttcctcgtttccctaaccgattccatgaccaacgactcacggatcgtt
tacttgcagatcacggcagccgagatattatccgaaggcggcgacctcaaactctcacga
gatttgatcgaacgagtcctcgttgatcgcctctcaggtaattccgcatccgcagaacct
ccctttcaatacctaatcggaatttatcgtcgtgcctgtgaagaacaaaagaaaattgtt
aatatgaaagataagttagttagggcacagatggaaacagttgtcaatcaagcgaagaag
ttatcagtttcctattgtagaattcatttaagtaatcccgatatgtttccggataatgat
agaactaggtctaatgtttccccattgttgccgttggttttcggtgaggttagtagctca
attgatacttttggtggtggtagtgttggtgcttgtcctggttttatagatgagctgttt
aaagatacggattacgagtcggtggagccgatattgaagcagttgtatgaggatttgaga
gggattgtgctcaagtgttctgcgcttgggaactttcagcagccgttgagggcgttgatg
tatttgataagttttccggttggtgctagggcgttggtgaatcatccgtggtggattccg
aaaggggcgtatttgaatgggagggtgattgagatgacgagtatcttggggccgtttttt
catgttagtgcgcttcctgatcagagtgttttcaaggggcagcctgatgttggtgaacag
tgtttttcggaatcgttgacgcgacggcctgcggatcttttgtcttcgttcacgacgatt
aaaactgttatgaataacttgtatgatggtttggcagaggttcttaggtcacttcttaag
aacacgagcacacgagagaatgtgctgcagtatattgcagaagtgattaacaaaaatgca
tcaagggctcatatacaggttgatccgctatcttctgctagttcgggcatgtttgtgaac
cttagtgctgttatgcttcgactgtgtgagcctttcttggacgcaaattcaacaaagaaa
gacaaaattgatcctaaatatgtattttatggatctcgtttggaattcaaagaattaacc
gcccttcatgcatcttcggaggaagttactgaatggctgaataaaaataatccaagcact
tctagcagtggagaatcgtcaagttactcatttatttgtgaatgcttctttatgactgca
cgggttcttaatttagggctgttgaaagccttttcagacttcaagcatcttgtgcaggac
atttcaagatgcgaggataatctggcaaccttaaaaaccatgcaagagcaatcaccttta
cctcgactggcccaggacattgctcgactggagaaggaaatcgaatcatttacacaagaa
aaactatgttacgaagctcagatattgagggatggcggacttcttcagcaggcactatct
ttctatcagttaatggtggtttggttggtaggtcgtataggtggtttcaaaatgcctcta
ccacaatcttgcccaatggaatttgcatgtatgcctgaacactttgtggaagatgctatg
gaattgcttatttttgcttctcggataccacgagctttagatggtgtaaagctggatgat
tttatgaacttcattatcatgttcatggcaagtccagagtacattaggaatccctattta
agagcaaaaatggttgaagtactcaactgctggatgcctcgtaggagtgacacatcatct
gccacaagtacactttttgaggggcaccaactttctgtccagtatcttgtgagaaatctt
ctaaaactttacattgacatcgaattcacgggctcacacacccagttctatgacaaattt
aacatccgacataatattgccgaacttctagagtatctttggcaggttcctgtacaccaa
aatgcttggaaacagattgccaaagaagaggaaaagggtgtttacctcaactttttgaac
ttcttaataaacgacagtatctttcttcttgacgaaagtctcaacaagattcttgaactc
aaagaactggaagctgagatgtctaacacggtcgaatgggaacaaagacctgcacaagag
aggcaggagaggactagacttttccactctcaagaaaatattattaggattgacatgaag
ttggccatggaagatgtgagcatgctcgctttctctactgagcaaattacagctcctttc
ttgctacccgagatggttgaaagagtcgccagcatgttgaattacttcctcttacaactt
gtgggcccccaaaggaaatcgttaagcttgaaggatcctgaaaaatacgagtttcgccca
aaagagttgctaaagcagattgtgaacatatatgttcatctggcaaggggggatcacgag
aacattttcccatctgccatcacgaaggatggacggtcctataacgaccagttattcaca
gaagctgcaaatgttcttagaagaataggtgaagatcccagaattatacaggcttttgat
gatcttggtagaaaggctaaagctgcagcatctgaagccatggatgctgaagctattctg
ggagacattccagatgaattccttgatcctatccagtacacgctaatgaaagatccagtt
atcttaccatcttcaagaatcatagtggaccgaccagtgattcagaggcatctattaagc
gacgctacggacccgttcaatcgttctcatcttacaccagatatgctgattccagacaca
gaactgaagcaaaaaattgaagaatttgtgaagtcacaacaaaggaagcaacatggtgaa
gagatgagtatgcaaagcagcagctttaaatcttcaattcagtcacctgatggtactggg
cctttgattgattag
DBGET
integrated database retrieval system
