KEGG   Helianthus annuus (common sunflower): 110912482
Entry
110912482         CDS       T05101                                 
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110912482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:han03041]
    110912482
Spliceosome [BR:han03041]
 Complex C
  Other components
   Step II factors
    110912482
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_WDHD1_1st EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML WD40_RFWD3 ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_VPS8 eIF2A WD_LRWD1 Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_IFT140_1st Beta-prop_SCAP PAN2_N
Other DBs
NCBI-GeneID: 110912482
NCBI-ProteinID: XP_022012909
LinkDB
Position
17:30803010..30805491
AA seq 592 aa
MDLLQTYKDSGNSDGEDHRMSDQSSPDSSPPRLSIVPKSAAPKVDDTMLSLTVAAAITNK
TLTKPLDPTQHVVEFNPTYDQLWAPIQGPAHPYAKDGIAQGMRNHKLGFVENASIEPFVF
DEQYNTFYKYGYAADPSASAGFNYVGDMDSLNGNDGVSVYNIPQHEQKKRKLENKMEALD
RERLDEEANGAVDPEEVANPATDAWLRKNRKSPWAGKKEGLQEELSEEQKKYAEEYAKKK
GEERDGVKDKGEAVTDKSTFHGKEEKDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGH
TKGVSAIRFFPKHGHLILSAGMDNKVKIWDVYNSGKCMRTYMGHSKAVRDISFCNDGTKF
LTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDVNT
GQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPAI
SLHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD
GEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD
NT seq 1779 nt   +upstreamnt  +downstreamnt
atggacctattacagacatacaaagactccggcaacagcgacggcgaagaccaccgtatg
tccgaccaatcctcaccggactcctcccctccccgcctctcaatcgtccccaaatccgcc
gcccccaaagtcgacgacaccatgctttctctcaccgttgccgctgcaatcaccaacaaa
accctaaccaaaccactggaccccacacaacacgtcgtcgaattcaacccgacctacgac
caactctgggctccgatccaaggccccgctcatccctacgctaaagacggcatcgctcaa
ggtatgcgtaatcacaaattagggtttgtagaaaacgcctcaattgaaccgtttgtgttt
gatgaacaatataatactttttataaatacggttatgctgccgatccctctgcttccgct
gggtttaattacgttggtgatatggatagtttgaacgggaacgacggcgtttcggtttat
aatattccacagcatgagcagaagaagcggaagcttgagaataagatggaagctttggac
agggagagattggatgaggaggcgaacggtgcggtggatcccgaggaggtggcgaatccg
gctacggatgcgtggttgcggaagaatcggaagagtccatgggcggggaagaaagaaggg
ttgcaggaggaattgagtgaggaacagaagaagtatgcggaagagtacgcgaaaaagaaa
ggggaggagcgagacggggttaaggataagggagaggcggttacggacaagagtacgttt
catgggaaagaggagaaggattatcaaggacggtcgtggattgcgccgccaaaggatgcg
aaggcgacgaatgatcattgttatataccgaagagattggtgcatacgtggagtgggcat
acaaagggggtttcggcgattaggtttttcccgaagcatgggcatttgattttgtcggct
gggatggataacaaggtgaagatttgggatgtgtataactcggggaagtgtatgaggact
tatatggggcattcgaaggcggtgagggatatatcattttgtaatgacgggacaaagttt
ttgactgcggggtatgataagaatattaagtattgggatacggaaacggggcaggtgata
tccacgttttcgacggggaagataccgtatgtggttaagttgaatccggatgatgataag
cagaatattcttttggcaggtatgagtgataagaagattgttcagtgggatgtgaatacg
gggcagattactcaggagtatgaccagcatcttggtgctgtgaatacgataacgtttgtt
gataataacagacggttcgtcacttcaagcgatgataagtctcttcgtgtatgggagttt
ggtatcccagttgttataaagtatataagtgaaccgcatatgcattcgatgccggcgatt
tcacttcatcctaacggaaattggttggcagcacagagtttggataatcagattctgatc
tatagcactagagagaggtttcagctgaataagaaaaagaggtttgcggggcatattgtt
gccggttatgcttgtcaagtgaatttttcgccggatggtaggtttgttatgtcaggggat
ggtgaaggtaaatgctggttttgggattggaaaagttgcaaagtgtttagaacgttaaag
tgtcataatggagtgtgcattggtgctgagtggcatcctttggagcagagcaaagttgca
acatgtggttgggatggcttaatcaagtattgggactag

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