Helianthus annuus (common sunflower): 110912482
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Entry
110912482 CDS
T05101
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110912482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110912482
Spliceosome [BR:
han03041
]
Complex C
Other components
Step II factors
110912482
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_RFWD3
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
eIF2A
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_SCAP
PAN2_N
Motif
Other DBs
NCBI-GeneID:
110912482
NCBI-ProteinID:
XP_022012909
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Position
17:30803010..30805491
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AA seq
592 aa
AA seq
DB search
MDLLQTYKDSGNSDGEDHRMSDQSSPDSSPPRLSIVPKSAAPKVDDTMLSLTVAAAITNK
TLTKPLDPTQHVVEFNPTYDQLWAPIQGPAHPYAKDGIAQGMRNHKLGFVENASIEPFVF
DEQYNTFYKYGYAADPSASAGFNYVGDMDSLNGNDGVSVYNIPQHEQKKRKLENKMEALD
RERLDEEANGAVDPEEVANPATDAWLRKNRKSPWAGKKEGLQEELSEEQKKYAEEYAKKK
GEERDGVKDKGEAVTDKSTFHGKEEKDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGH
TKGVSAIRFFPKHGHLILSAGMDNKVKIWDVYNSGKCMRTYMGHSKAVRDISFCNDGTKF
LTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDVNT
GQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPAI
SLHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD
GEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggacctattacagacatacaaagactccggcaacagcgacggcgaagaccaccgtatg
tccgaccaatcctcaccggactcctcccctccccgcctctcaatcgtccccaaatccgcc
gcccccaaagtcgacgacaccatgctttctctcaccgttgccgctgcaatcaccaacaaa
accctaaccaaaccactggaccccacacaacacgtcgtcgaattcaacccgacctacgac
caactctgggctccgatccaaggccccgctcatccctacgctaaagacggcatcgctcaa
ggtatgcgtaatcacaaattagggtttgtagaaaacgcctcaattgaaccgtttgtgttt
gatgaacaatataatactttttataaatacggttatgctgccgatccctctgcttccgct
gggtttaattacgttggtgatatggatagtttgaacgggaacgacggcgtttcggtttat
aatattccacagcatgagcagaagaagcggaagcttgagaataagatggaagctttggac
agggagagattggatgaggaggcgaacggtgcggtggatcccgaggaggtggcgaatccg
gctacggatgcgtggttgcggaagaatcggaagagtccatgggcggggaagaaagaaggg
ttgcaggaggaattgagtgaggaacagaagaagtatgcggaagagtacgcgaaaaagaaa
ggggaggagcgagacggggttaaggataagggagaggcggttacggacaagagtacgttt
catgggaaagaggagaaggattatcaaggacggtcgtggattgcgccgccaaaggatgcg
aaggcgacgaatgatcattgttatataccgaagagattggtgcatacgtggagtgggcat
acaaagggggtttcggcgattaggtttttcccgaagcatgggcatttgattttgtcggct
gggatggataacaaggtgaagatttgggatgtgtataactcggggaagtgtatgaggact
tatatggggcattcgaaggcggtgagggatatatcattttgtaatgacgggacaaagttt
ttgactgcggggtatgataagaatattaagtattgggatacggaaacggggcaggtgata
tccacgttttcgacggggaagataccgtatgtggttaagttgaatccggatgatgataag
cagaatattcttttggcaggtatgagtgataagaagattgttcagtgggatgtgaatacg
gggcagattactcaggagtatgaccagcatcttggtgctgtgaatacgataacgtttgtt
gataataacagacggttcgtcacttcaagcgatgataagtctcttcgtgtatgggagttt
ggtatcccagttgttataaagtatataagtgaaccgcatatgcattcgatgccggcgatt
tcacttcatcctaacggaaattggttggcagcacagagtttggataatcagattctgatc
tatagcactagagagaggtttcagctgaataagaaaaagaggtttgcggggcatattgtt
gccggttatgcttgtcaagtgaatttttcgccggatggtaggtttgttatgtcaggggat
ggtgaaggtaaatgctggttttgggattggaaaagttgcaaagtgtttagaacgttaaag
tgtcataatggagtgtgcattggtgctgagtggcatcctttggagcagagcaaagttgca
acatgtggttgggatggcttaatcaagtattgggactag
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