Helianthus annuus (common sunflower): 110912636
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Entry
110912636 CDS
T05101
Name
(RefSeq) E3 ubiquitin-protein ligase RING1 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110912636
04121 Ubiquitin system [BR:
han04121
]
110912636
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110912636
Membrane trafficking [BR:
han04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110912636
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110912636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-HC5HC2H
Anti-TRAP
DUF7573
Motif
Other DBs
NCBI-GeneID:
110912636
NCBI-ProteinID:
XP_022013096
LinkDB
All DBs
Position
15:complement(146285714..146289574)
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AA seq
386 aa
AA seq
DB search
MMPHTLSILNLKPPKASFPISEVITTIKTMSQRVYRDGDGGDGDGDGGAAQLYFCHECNR
TVSIRPSASSELLCPDCNGGFLEEYENPNPSSGNPFLDFDDASPFASLASGFPLVFSSSS
SDFQNPNDLSALFGGPMSRPSDGGVQTPGEFNPFAFLQNYLNTLRAGGANIQFVIENNTD
GDPSGFRVPSNLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAVENLPSVKISKELME
SDYSDCAVCKDSFELDEDAKQLPCKHIYHPDCILPWLELHNSCPVCRYELPTDDPDYENK
SRQSSGGGGGGSGSGGASSGGSGGGSHDNPLTPRTIERRFRINLPWPFSGFGTSAETSNS
GAGNNNNNSGDGNQGSGGQARQEDLD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatgccacacacactttcaattctcaacttaaaaccacccaaagcctcttttcccatt
tctgaagttattacaaccattaaaacaatgtcacaaagagtctacagggacggcgacggt
ggcgatggcgatggcgacggcggtgccgcacagctttacttctgccatgaatgcaaccgt
acggtttccattagaccttccgcttcttccgaactgctttgccccgattgtaacggtgga
ttccttgaagaatacgaaaaccctaaccctagctccggcaatccgtttctcgattttgat
gatgcgtcgccgtttgcctcgttggcgtccggttttcctctcgtcttctcttcgagttct
tctgattttcagaaccctaacgatttgtcggcgttgtttggtggcccgatgtctcgaccg
tccgatggaggtgttcaaacccctggggagtttaatccgtttgcgtttttacagaattat
cttaatactttgcgagcaggtggagcaaatattcagtttgtaattgagaacaatacggat
ggggatccgtcagggtttcgtgttccgtcgaatttaggtgattactttattggtcctgga
ttggaacaactgattcaacagcttgctgagaatgatccgaatcggtatggcacgcctcct
gcgtcgaaatcggctgttgaaaaccttccgagtgttaaaattagtaaggagttgatggaa
tccgattattcggattgtgcagtgtgtaaagatagctttgaacttgatgaggatgctaag
cagttgccttgtaagcatatttaccatccggattgtattttgccatggttggagctgcat
aattcttgtccggtttgtcggtatgaattgccaacggatgatccggattatgagaataag
tctaggcaaagttctggcggtggcggtggtggttctggttctggtggtgcgtcgtcgggt
ggttcagggggcggttctcatgataatcctctgacacctaggactattgaaaggaggttt
aggataaacctgccgtggcctttttcggggttcggtacgtctgctgagacgagcaatagt
ggagcagggaacaacaacaacaattcaggagatggtaatcaagggagtggtggtcaggct
agacaagaagatcttgattga
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