KEGG   Helianthus annuus (common sunflower): 110912640
Entry
110912640         CDS       T05101                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
han  Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:han00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:han03041]
    110912640
Spliceosome [BR:han03041]
 Complex B
  Other components
   Complex B specific factors
    110912640
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML LisH_TPL ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_WDR75_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Ge1_WD40 Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 DUF7165 Beta-prop_WDR75_2nd VPS8_N Beta-prop_IFT122_2nd Beta-prop_LRRK2 Mala_s_1-like zf_topless DUF5738 WD40_like Beta-prop_IP5PC_F RMC1_N
Other DBs
NCBI-GeneID: 110912640
NCBI-ProteinID: XP_022013099
LinkDB
Position
15:146223542..146231216
AA seq 513 aa
MSALEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSLETFIADINSGRWDAI
LPQVAQLKLPRKTLEDLYEQIVLEMIELRELDTARAILRQTQAMSVMKQEEPERYLRLEH
LLVRTYFDPHEAYQDSTKEKRRAQIAQAIAAEVSVVPPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDKYPTTLGHTIKFGKKSHPENARFSPDGQFLVSCSVDGFIEV
WDHISGKLKKDLQYQAEESFMMHDDAVLCIDFSRDSEMLASGSQDGKIKVWRIRNGQCLR
RLENAHSRGVTSVAFTRDGTQILSTSFDGTARIHGIKGGKMLKEFRGHTSYVNDAIFTSD
GLRIITASSDCTVKVWDLKTADCLQTFKPPPPLRGGDASVNSVHLSPKNPDHVIVCNKTS
SIYLMTLQGQVVRSFSSGKKEGGDFVAACISPKGEWIYCIGEDRNLYCFSHQSGKLEHLM
KVHEKDVIGICHHPHRNLIATYGEDCTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctgccctagaaatcgaagctcgggatgtgattaaaatagttctccagttctgcaaa
gaaaactcactgcatcaaactttccaaacattacaaagcgaatgccaagtatctctgaac
acagtagacagccttgaaacatttatagcagatattaacagcggtagatgggatgcaata
ttgcctcaagtggcacaacttaagcttccaagaaagacacttgaagatttatatgagcag
attgttcttgaaatgattgaactgagggagttggatacagctcgtgctatattaaggcaa
actcaagcaatgagtgtcatgaaacaagaagaaccagaaagatacttaagacttgagcat
ctcttagttcgaacttattttgatcctcatgaggcttatcaagactccacgaaagagaaa
cggcgcgcacagattgctcaagctattgctgcagaagtctctgtggttccaccatcacgt
ttaatggctctaattggtcaagctttgaaatggcaacaacaccaagggttacttccacct
ggaacacagtttgatctctttcgaggaacagctgctatgaaacaagatgtagatgataag
tacccaacaactcttggtcatactataaagtttggaaagaaaagtcaccctgaaaatgct
cggttctcaccggatggacagtttcttgtttcttgctctgttgatgggtttattgaggtt
tgggatcatataagtgggaagcttaaaaaagatcttcagtaccaagcagaagaatctttt
atgatgcatgatgatgctgttttgtgcattgactttagtagagattcagagatgcttgct
tctggatcccaagatggaaagattaaagtttggcgtataagaaatggccaatgcttgcgg
cgccttgaaaatgctcattctcggggtgtcactagtgttgcatttacccgggatggaact
cagatattaagcacatcatttgacggaactgccagaattcatggcataaaaggtggaaaa
atgttgaaggaatttcgtggtcacacttcgtacgtaaatgatgccatttttacaagtgat
ggacttcgtataattacagcatcaagtgattgtacagtaaaggtttgggatttaaagact
gcagattgtctacaaacattcaagccgccacctcctttgaggggaggtgacgcgtccgta
aattctgtccacctgtcacccaaaaatcctgaccatgttatagtttgtaacaagacatca
tctatttatcttatgacacttcaaggacaggttgtgagaagtttctcatctggtaaaaag
gagggtggagattttgttgccgcttgtatatcaccgaaaggagaatggatatattgtatt
ggtgaagataggaacctgtattgcttcagccatcaatctgggaaacttgaacacttgatg
aaggtgcatgagaaggatgtaatcggtatttgtcaccatcctcataggaatcttatagcc
acatatggtgaagactgcaccatgaaactatggaagccttaa

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