Helianthus annuus (common sunflower): 110912726
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Entry
110912726 CDS
T05101
Name
(RefSeq) U-box domain-containing protein 13 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
han00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110912726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110912726
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110912726
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
U-box type E3
110912726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
HEAT_2
zf-RING_UBOX
Neurochondrin
zf-Nse
zf-C3HC4_4
MLKL_N
zf-C3HC4_2
Arm_2
zf-C3HC4
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
110912726
NCBI-ProteinID:
XP_022013218
LinkDB
All DBs
Position
8:complement(162460933..162464861)
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AA seq
647 aa
AA seq
DB search
MADVGKIGVILKLIDIVNEISVISDYRSTVRKQFFNLSRRLKLLNPLFEEIRDVKEAVPD
ESFRSLVSLMEALESAKELLRLGSEGSKIYLALEKEEIMKKYQEVTERLEKDLEGISFEK
LDISDEVKEQVALVLAQFRRAKGRTDAPDVELNEDLSSLYDKGSDVAADPSVLKRLIEKL
QLTRINDLTHESITLHEMVTASDGDPGENIEKMSMLLKLIKDFVQTDNPSADSPPGETSA
PPNSNNQETSSKSYKNILIPDDFRCPISLELMKDPVIVSTGQTYERTCIEKWLEAGHKTC
PKTQQNLTSTVLIPNYVLRSLIAQWCEANGIDPPQRAGRPTSACTPAERSLINVLLTKLK
SVSPDDQRTAAGEIRLLAKRNADNRVAIAEAGAIPLLTHLLTAPDSRTQEHAVTALLNLS
ICEDNKGSIVSSGAVPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGSLGAIPPLV
LLLSEGTQRGKKDAATALFNLCIYQGNKGRAVRAGVITTLMELLTEPQGGMKDEALAILA
ILSSHPEGKVAIGKSDAVRVLVEFIGSGSPRNKENAAAVLVHLCSGDNKYLVEAQELGVM
GVLVDLLHHGTDRGKRKAAQLLEKITRYTEQQKLSQTLSQAIAESEE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtaggaaaaattggagtgatattgaagctgattgatatcgtgaacgagatt
tcggtgatatcggattaccggagcacggtaaggaagcagttttttaatttatctagaagg
ttgaagctgttgaatccgttgtttgaagagattcgcgatgttaaagaggcggttcccgat
gaatcgttccgatctcttgtttcgttgatggaggcgttggaatctgctaaggagttgctc
agattggggagtgaagggagtaagatttatttggccctggagaaagaagaaataatgaaa
aaataccaagaagttacggagcgtttggaaaaagatctagaaggcatttcatttgagaaa
cttgacatatcagatgaagttaaagaacaggttgcacttgttctcgctcaattcagaaga
gccaaaggaagaaccgacgcaccagatgttgagttgaatgaagatctttcatccctttac
gataagggtagtgatgtggcagcagatccttcggtcttaaaacgattgattgaaaaacta
caattaaccagaattaacgatctcacacatgaatcaataacattgcatgaaatggttacc
gcgagcgacggtgatcccggagaaaatatagaaaaaatgtcaatgttattgaaactgatc
aaagattttgtgcaaaccgataatccaagtgcagattcacctcctggtgaaacttctgct
ccaccaaattcaaacaatcaagaaacttcgtccaagagttataaaaatatattaatacct
gatgatttccgttgtcctatatcgctcgagctaatgaaagatcctgttatcgtctcaacc
gggcagacgtatgaacgaacatgtatagagaaatggttagaagccgggcacaaaacatgc
cctaaaacacagcaaaacctaacgagtaccgttctcataccaaattacgtgttacgaagt
cttatagctcaatggtgcgaggcaaatggtatcgacccaccacaacgggcggggcggcca
acttctgcgtgcacccccgcagaacggtctctgataaacgtgctgctaactaagctcaaa
tcggttagtccagacgaccaacgaactgcagccggtgaaatccgtcttcttgcaaaacga
aacgctgataaccgtgtagccatagccgaagccggtgcgatcccgcttctcacacaccta
ctaaccgcaccggactcacgaacgcaagaacatgcagtcaccgcgcttttaaacctttcg
atttgcgaagataacaaaggaagcatcgtgtcttctggcgcagtccccgggattgttcaa
gtgttaaaaaagggtagcatggaagcacgtgaaaacgcagccgccacgcttttcagtctc
tcggtgatcgatgaaaacaaggtgacaatcggttcattaggagcaatcccgccactcgta
ttactattaagcgaaggtacacaaagagggaaaaaagacgctgcaaccgcgttgtttaac
ctatgcatatatcaaggtaacaagggtcgggccgtgagggcgggtgtgatcaccacatta
atggagcttttaaccgaaccgcaaggcgggatgaaagacgaggcgttagccattctcgcc
atactctcgagccatccagaaggaaaggtggctatcggtaaatccgatgcggttcgcgtt
ttggtggagtttatcgggtctgggtctccgagaaataaagagaacgccgcagcggttttg
gttcatctttgttcgggtgataataagtatttagtggaagcgcaagaactcggggtgatg
ggggttctggtggatttgctacatcatggtaccgatagagggaaaagaaaggcggcgcag
ttgttggagaagataacgcgatacaccgagcaacagaagttatctcaaactttgtctcaa
gcgattgcggaaagcgaagaatga
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