Helianthus annuus (common sunflower): 110912938
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Entry
110912938 CDS
T05101
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1 isoform X1
KO
K28108
shortage in chiasmata 1
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
han03036
]
110912938
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Meiosis-specific proteins
Others
110912938
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GFIT
Other DBs
NCBI-GeneID:
110912938
NCBI-ProteinID:
XP_022013468
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Position
15:complement(168248026..168254594)
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AA seq
1206 aa
AA seq
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MRTRFLTDVFNSSAASNRLQTLDFLRFPPPELPSADQFIFNSISCFDQLNFITLAPEIDT
ISVNESLCKFLSDVLPQAVSTEIDRQIVTEVASEVKIKEEGTFTLVEFETPELCISLEDS
SVLHEEKIQIFFEVTDSEFPTDLLDFSLELQPVMDIHKSIFYVEDICVEIQEEHKSDLFK
DGSSVRDQTRSDLRSFPVLEVDEISLGINSYIYEDKYTIFESNDLQQWMLKDELTCDSNE
LLLSMKFDISENLLNHSSSECRKFEVPCVNVSPEYIIDAIEQPLMLIPLALEQLEFFDTK
TAHFSQVFSDIESISEVEHCEQMFGNGNTSLSVFNNLIVTHELVLTDDSFKSLPVPIISD
HENILSVQTIVEEIFVRLKLQPSSTSDDIYLDWHLLEEDICSRNKHASLKMFEDIDTYHI
NADISSCDSLVLEFVLSDACSNEQTTKENTEVLNIERFGNLMEHVVSDKIYSGEICKKHV
VNKAHQFVESMSQFDDLDFFLNPLEATCVKKQKSVDTIHETDVALPMVLENDPIETHDAG
RKQHQTLENETRSRGDFHSTSILNEISKNLEGPLHSTHTELKNSMESTEATYEVPQLPLL
TESKKVNTNTPIIVNTQNGETEMIISRRSTYQKILAMEKEGIQVVERDLNLPVDVIISAA
VCLVLYDSNNIIKKTNSSDGASSLSSCVENIAANVLMSLSFALSGCVLIFEGEVGFLGGI
MESSDELYAAAASLGIDLQLFYSYSSETTDAIILNCIANAAKSTRGVYPRMPESETLAES
FLSKFTSLNPLSAHAILSSVGTLLEFFEMSHQQRVCALQKYLVPQASVLLFSSLCRYGER
EDSRSGMTDCCSSVSSGHDSGYCCPKVDHEKKKRKYVASPETKAMPVDYVFQWDHPKSVN
SHMFWNSEGDEICDGIEKSNIDFDEIYFRSDARMMPNRPTLTDASFGQSMPIPDKIRSHT
NKREIIHIDDGEDIFDFSKNQRSDARMMPNHPSLTESSFGQRKKAHMPVSDMFNAQTNKG
EIININDDDMTSEWFGLPSFSTAAEINSDLDSDLMNNFAPFKGKVSCYGRTPLSKAISCD
QPQKGSPWTIDFLNRIKEKSRTRHQSLPNISSAPCFGYSGNNALKCRKRKSPSILDFYRY
TSGSTVKSMEHKGQKGHIQAPSSSKAVQTPIDKRAKRKLTFSTTGSKGQSKLMWSDKANQ
TMKGRL
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgagaacacgcttcctcaccgacgttttcaactcctccgccgcatctaaccgcctacaa
accctagacttcctccgatttccacctcctgagctcccgtccgccgatcaattcatcttc
aacagcatctcgtgcttcgatcaactcaatttcatcaccctagctcctgaaatcgataca
atttccgtcaatgaatcgctctgtaagttcttatccgacgttcttcctcaagctgtcagt
accgagatcgatcggcagattgttacggaagtagcatcggaggtgaaaatcaaagaagaa
ggtacttttacactggttgaattcgaaactcctgagctttgtatatccttggaagattct
agcgttttacatgaagagaagatacaaattttctttgaagttacagattcagaatttcct
actgatctgcttgatttttcacttgagctgcagccagttatggatatacacaagtcgatt
ttctacgtagaagatatttgtgtagaaatccaggaagagcataaatccgatctgtttaaa
gatggcagttcggtcagggaccaaacacgatctgatcttagatcatttcctgttttggaa
gtagacgagattagtctgggaatcaacagctatatatacgaggacaaatatacgatattt
gaaagcaacgatctccaacaatggatgctaaaagatgaattgacgtgtgattccaacgag
cttttgctttccatgaaattcgacatatcagaaaatcttttaaaccactcttcttccgaa
tgtcgtaaatttgaggtaccatgtgtgaatgtttctcctgagtacataatagatgccata
gaacagccattaatgttaatcccacttgcccttgaacaactcgaattctttgatacaaag
actgcacatttctctcaagtgttctccgacattgaaagtataagcgaagtagaacattgc
gaacagatgtttggcaatggcaacacatcattaagcgttttcaacaacttaattgttaca
catgaacttgttctaacagatgactctttcaaatcactccctgttcctattatttccgat
catgaaaacatactgtcggtacaaacgattgttgaggaaatattcgtaaggttgaagctg
cagccttcctccacttcagatgacatatacttggactggcatctattggaagaagatatt
tgcagtcgtaataaacacgcgtctttgaaaatgtttgaggatatcgatacttaccatatc
aatgcagacatcagttcttgtgatagtctggttttggagtttgttttatctgatgcatgc
tcaaatgagcaaacgacaaaagagaacaccgaggttctgaacatcgaaaggtttggaaat
ttgatggagcatgtcgttagtgataaaatttattcaggtgaaatatgcaagaagcatgtg
gttaacaaggctcatcagtttgttgaatcaatgtcacagtttgatgatcttgactttttc
ttgaaccctttagaggctacatgtgtgaaaaagcaaaagtctgttgatacaatacacgaa
acggatgttgcccttcctatggttttggaaaacgacccgattgagacacatgatgccgga
agaaaacaacatcagaccttggagaacgagacccgttcaagaggagattttcattctact
tcaatactaaacgagatcagcaagaacttagaaggaccattacattctacacacactgag
ttaaagaacagcatggaatctaccgaagcaacctatgaagtaccacaactgccgttactt
acagagtcaaagaaggtcaacacaaacacgcctataatcgtaaatacccaaaatggtgaa
accgaaatgataatttccagaagaagcacataccaaaaaattcttgcaatggaaaaagaa
ggcatacaggttgttgaaagggatctaaatcttccggttgatgttataattagtgctgca
gtttgtttagtgctgtatgacagcaacaacattataaaaaagacgaattcgtcagatggt
gcttcttcgttatcttcatgtgttgaaaatattgcagcaaatgttttaatgtcactcagt
ttcgctctcagtggctgtgttctgatattcgaaggagaagtgggattcctcggtggtata
atggaatcatcagatgaactatatgctgcagcagcaagtttaggaatcgacttgcagctt
ttttattcgtattcatctgaaacaaccgatgcgataatactaaactgtatcgcgaatgct
gcaaagtcaactagaggcgtatatcctaggatgccggaatcagaaacgctagctgaatca
tttctatcgaaatttacttcacttaatccactatcagctcatgcgatattatcttcggtt
ggaacgctccttgagtttttcgaaatgtctcatcagcaaagggtttgtgctctgcaaaag
tatcttgttccgcaagcaagtgttttgttgtttagttctttgtgtagatatggagagaga
gaagattctagatcgggaatgacggattgttgttcttcggtttcttctggtcatgactcc
ggctactgttgtcctaaggttgatcatgagaaaaagaaacgaaagtacgtcgcgagtccc
gagacgaaagccatgcctgtcgattacgtgttccaatgggatcatccgaaatccgttaat
tcgcatatgttttggaattcagaaggtgacgagatatgtgatggtattgaaaagtctaat
atagattttgatgagatttactttagatctgatgctcgtatgatgccgaatcgtcctact
ttgactgatgcatcgtttggtcaaagcatgccgattccggacaagatacgcagccacact
aataaacgggaaattattcacattgatgatggtgaagacatatttgactttagtaaaaat
caaagatcggatgctcgtatgatgccgaatcatcctagtttgaccgagtcatcatttggt
caacgcaagaaggcgcatatgcctgtttcggacatgtttaatgcccagactaataaaggg
gaaattatcaacattaatgatgatgatatgacatctgagtggttcggtcttcctagtttt
tctacagctgctgagattaactccgatttagattcagatttaatgaacaatttcgcgcct
ttcaaagggaaggtttcgtgttacggtaggacaccgctatcgaaagcgatatcctgtgat
caaccgcagaaaggctcaccgtggactatagatttccttaacagaataaaggaaaagagt
aggacgcgtcaccaatctctaccgaacatatcgtcggccccgtgttttggctactcaggg
aataatgcattaaagtgtagaaagagaaaaagcccgtctatactcgacttctacaggtac
acgagtggcagtacggtgaaaagtatggaacacaaagggcaaaaaggtcatatacaagca
ccaagttcatcaaaagctgtacagactccaattgataagagggcaaaaaggaagctaacc
ttttccaccactggaagcaagggacaaagcaagttgatgtggagcgataaggctaatcaa
acaatgaaaggaagattgtaa
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