KEGG   Helianthus annuus (common sunflower): 110914699
Entry
110914699         CDS       T05101                                 
Name
(RefSeq) THO complex subunit 5B
  KO
K13174  THO complex subunit 5
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110914699
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110914699
   03041 Spliceosome [BR:han03041]
    110914699
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110914699
Spliceosome [BR:han03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110914699
SSDB
Motif
Pfam: FmiP_Thoc5 CAF1C_H4-bd
Other DBs
NCBI-GeneID: 110914699
NCBI-ProteinID: XP_022015163
LinkDB
Position
2:41565907..41571071
AA seq 810 aa
MDLNMVEPGEILPDRKIDTSAYDLLQTTRTSVEDIVAQMLSIKKDGGDTTRSQLPELVTQ
MLLNFVNLRKANRSILLEEDLVKAETEHAKAPVDFTTLQLHNLMYEKNHYVKAIKACKDF
KSKYPDIELVPEEEFHKDAPEEIKNSVQSKDSAHNLMLKRLNFELFQRKELAKLHEKLEE
QKKVLQDTIANRKKFLSSLPSQLKSLKKASLPVQNQLGILHTKKLKQHQSAELLPPPLFM
IYSQMLAHKEAFGESIDLEIVGSLKDALTFARQQANKDNGMSTTNMENSKMEDDVVDEED
DGQRRRKRPKKVQVKENVDAARIYQTHPLTLILQIHDDEASDPKSTKLIALTFEYLLKLN
VVCVGIERSNDGPESNILCNLFPNDPGLELPHQSAKLWTGDGPIFDEKRSSRPYKWAQHL
AGIDFLPEVSPLLTAGADSTNGETTKQTAIVSGLSVYRQQNRVQTVVQRIRARKKAQLAL
AEQIDSLTKLKWPSLTCQTVPWFSHARLCSLQNWTIIPSHKPTVPIEEQNQSRQELETVA
GPDTSKSEIENIREDGELPSLNPAATVANETVVTVTPLKISGTDHSKRLALITKSVASPM
SKGKSPSSRKLDEDLDLMLVSDDEVDEPLQSEPEPVLTGNGGVHVIDNSWIACGARDYRL
VLTRKVNSGDGYIKLEAKITVSMEYPLRPPLFTLNLFRAASTETESEAEANEWFNELRAM
EAEVNIHVIKTIPWEEENMVLGHQICCLAMLFDFYVNGDSSTERGNSTCVVDVGLCKPVN
GGLASRTYRGRDHRKMISWKDNGCTSGYPS
NT seq 2433 nt   +upstreamnt  +downstreamnt
atggacctaaacatggtggaacccggcgagattctaccggatcggaaaatagatacgtcg
gcatacgatctgcttcaaactactcgcacttccgtcgaggatatagtcgcacagatgctt
tcgattaagaaagacggaggcgatactaccagatctcaattacctgaactcgtcactcag
atgcttctcaacttcgtcaatcttcgtaaggcaaatcgttctatattgcttgaagaagat
cttgtgaaagcagaaacagaacatgcaaaagcacctgtggacttcacaaccctgcaactc
cacaatcttatgtatgagaagaatcattatgttaaagcgataaaggcttgcaaagacttc
aagtcaaagtatccggacattgaacttgttcccgaagaagagtttcacaaagacgcgcca
gaagaaataaaaaactccgtacagtcgaaagacagtgcccataatttgatgcttaagagg
ctcaactttgagctgttccagcgaaaagagttggcaaaacttcatgagaaactggaagag
caaaagaaagttcttcaggacactattgcaaacaggaaaaagtttctttcaagtcttcct
tcacaacttaaatctttaaaaaaggcatctttgccggtgcaaaaccaactgggaattctt
cacacaaagaaactaaagcagcatcaatcagcagagttgcttccacctcctcttttcatg
atttactcacaaatgttggctcataaagaagcgttcggcgagagtatcgatctcgagatc
gtgggaagcttgaaagacgctcttacttttgcacgacaacaagcgaataaggataacggc
atgtccactactaatatggagaactccaagatggaagatgatgtggttgacgaggaagat
gacggtcaacggaggagaaagcgtccgaaaaaagtccaagtaaaagaaaacgttgacgcg
gcaagaatataccaaacacacccacttacacttatcctccaaatacacgatgacgaggca
tctgatcctaaatctacaaagcttattgcattaacattcgagtatttgttgaagttgaat
gttgtttgcgttggtattgagagatcgaatgacggcccagagagtaacattttatgcaat
cttttcccaaatgacccgggactcgagcttcctcaccagtcagctaagctttggactggt
gatggcccaatattcgatgaaaaacgatcttcacgtccgtataaatgggcccaacattta
gcgggaattgattttttaccagaagtttcaccccttcttacagcaggtgcagattctaca
aacggtgaaacaacaaaacaaactgctatagtttccgggctatcagtatatcgccagcag
aatcgggtccagactgttgttcaaagaattcgggcccgaaagaaggcccaactggccctt
gcggaacagattgactcgctaacaaagcttaaatggcctagtttgacttgtcaaaccgta
ccgtggttttcgcatgcccgtctatgcagtttacaaaactggacaattataccctcacat
aagcccaccgtacccattgaagaacaaaatcaatcccgtcaagaactcgagacggttgct
ggacccgacacttcaaagtctgagatagagaacatacgcgaagacggcgagcttccgtct
ctaaatccagctgcaaccgttgcgaatgaaaccgtggttacagttacgccgttgaagata
tcaggcactgatcactcgaaacgtcttgcgttgattactaaatcagtggcgtctccaatg
agcaagggtaaatcacctagctctagaaagcttgatgaagatttggatttgatgttagtg
tctgacgatgaggtggatgagccgttacaatccgagcctgaacctgtactaacagggaat
ggaggcgtacatgtgattgataactcgtggattgcgtgtggggcccgggactaccgtctt
gttttaacgagaaaagtcaacagtggtgatgggtatataaagttagaagcaaagatcaca
gtcagcatggagtatcccctcaggccgccactttttacgttgaatctttttagagccgct
agtacggaaaccgaatcagaggctgaggctaacgagtggtttaatgaactccgggccatg
gaagctgaggtgaatattcatgtgataaaaacaataccctgggaggaagaaaacatggta
ttgggccatcaaatatgttgccttgcaatgctgtttgacttttacgtgaacggagattca
tctaccgagaggggaaatagcacttgtgtggttgatgtcggtttgtgcaagcccgttaat
ggtgggcttgcatccagaacatacaggggccgggatcataggaaaatgatctcctggaaa
gacaacgggtgcacttctggatatcctagctaa

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