Helianthus annuus (common sunflower): 110915327
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Entry
110915327 CDS
T05101
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03020
RNA polymerase
han03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110915327
09124 Replication and repair
03420 Nucleotide excision repair
110915327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110915327
03400 DNA repair and recombination proteins [BR:
han03400
]
110915327
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110915327
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110915327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
ATP-synt_DE_N
Motif
Other DBs
NCBI-GeneID:
110915327
NCBI-ProteinID:
XP_022015698
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Position
16:complement(197533566..197536707)
Genome browser
AA seq
320 aa
AA seq
DB search
MDGASYQRFPKVKIRELKDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCINDQTLDV
TSKDLYSSDHTVVPVDFSDATSGFENPEDQRGITIVKLRKGQELRLRAIARKGIGKDHAK
WSPAATVTFMYEPEIHINEEMMETLSLEEKTSVVESSPTKVFALNPHTQQVEVVDPEAYT
YDDEVLKKVEAMGKPGLIEIYAKEDSFIFTVESTGAVKASQLVINAIDVLKQKLDAVRLL
EDTVEADDQFGELGAHMRGG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggacggagcatcataccagaggttcccaaaggtcaaaattcgcgagctaaaagacgac
tacgcgaaattcgagctccgagaaaccgacgcaagcatggcgaacgcactccggcgagtg
atgatcgctgaggttccgacaatcgcgatcgatctggtcgaaatcgaggtgaactcatcg
gttctgaacgacgagttcattgcgcatcgtctcggcctcattcctctgacaagcgagcgt
gcgatgagcatgcgcttctcacgtgactgcgatgcctgtgacggtgacggccagtgcgag
ttttgttctgtggagtttcatttgagagctaagtgtattaatgatcagacgcttgatgtt
acgagtaaggatctctatagctctgatcatactgttgtgcctgttgatttctctgatgct
acttctggttttgagaatcctgaagatcaaaggggcatcaccattgtgaaacttcgcaaa
ggacaagaactgaggctaagagcaatagctagaaagggtatcggaaaagatcatgcaaaa
tggtcacctgctgcaactgtgactttcatgtacgagcctgagattcacatcaatgaagaa
atgatggagacgttatcacttgaagagaaaacaagtgttgttgagagcagcccgaccaaa
gtctttgccttaaatccccatactcagcaggtggaagtggtggatcccgaggcatacaca
tatgacgatgaagtgctgaagaaagtggaagctatggggaaaccagggcttattgaaatc
tatgcaaaagaagacagcttcatcttcacggttgaatcaactggtgcggtcaaggcttct
cagttggtgattaatgccattgatgtcttgaaacagaagctggatgcggttcgcttgttg
gaagatactgtcgaagcagatgatcagtttggggaattaggtgctcatatgcgtggaggt
tga
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