Helianthus annuus (common sunflower): 110915660
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Entry
110915660 CDS
T05101
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03022
Basal transcription factors
han03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110915660
09124 Replication and repair
03420 Nucleotide excision repair
110915660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110915660
03400 DNA repair and recombination proteins [BR:
han03400
]
110915660
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110915660
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110915660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
TMEM62_C
Motif
Other DBs
NCBI-GeneID:
110915660
NCBI-ProteinID:
XP_022016082
LinkDB
All DBs
Position
16:complement(204242334..204257665)
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AA seq
287 aa
AA seq
DB search
MTPVTSKQYADDVSLLMVLIDTNPLFWSSTAAPLSFSKFLSQVLSFVNSILLLNQLNQVM
VIATGLNSCDYIYDSSSGPTTPRFDTLLQKLEDFVVKDEELNKDDSVDGIGSSLLSGSLS
MALCYIQRVFRSGSLHPQPRILCMHGSQDGSGQYVAIMNSIFSAQRSMVPIDSCVIGSQH
SAFLQQASYITGGVYLKPQQPDGLFQYLTTVFATDLHSRSYLQLPKPVGVDFRASCFCHK
NTIDMGYICSVCLSIFCKHHKKCSTCGSAFGQPQTNISASNQKTKAP
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgttacatcaaagcagtatgcagatgatgtaagcctgctaatggtgttaatc
gacacaaatccgttgttctggagctcaactgctgcccctttatcgttctcgaagttccta
tctcaagttctttctttcgtaaattcaatacttctactaaatcaactgaatcaagttatg
gtgatagcgactggcttaaactcctgtgattacatttacgattcttcatcggggcccaca
accccgagattcgataccctgttgcagaaattggaggattttgtggttaaagatgaagag
cttaataaagatgactcggttgacgggatcgggtcatccttgctttctggatctctttca
atggcgctctgttatatacaacgcgtatttcgttctgggtcacttcatccacaacctcgg
attttgtgtatgcatggatcacaagatggatctggacaatacgttgccatcatgaattca
attttctctgctcaaagatcaatggtacctatagattcttgtgttatcggatcacaacat
tcggcatttttacaacaggcttcttatataaccggaggtgtatatctgaagccacaacag
cctgatggattgtttcagtatctaacgacggtatttgcaacagatttacattcccgtagc
tacttacagctccctaagcccgtgggtgtagatttccgtgcttcgtgtttttgtcacaaa
aacacaatcgacatgggatacatttgctctgtttgtctgtctattttctgtaagcatcac
aagaaatgttcgacttgtgggtcggctttcggtcaaccccaaacaaacatatcggcatcg
aatcagaagacgaaagctccttaa
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integrated database retrieval system
