Helianthus annuus (common sunflower): 110915694
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Entry
110915694 CDS
T05101
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110915694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
han03032
]
110915694
03400 DNA repair and recombination proteins [BR:
han03400
]
110915694
DNA replication proteins [BR:
han03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
110915694
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110915694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
TopBP1_BRCT0
ECT2_BRCT0
DUF8149
Motif
Other DBs
NCBI-GeneID:
110915694
NCBI-ProteinID:
XP_022016116
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All DBs
Position
2:complement(94359277..94367110)
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AA seq
933 aa
AA seq
DB search
MRKTTFKGANVFMSRNLVAPEIFDSLHDVLKDNGADIVLCCDPSRNGPNDFHIISSRDHE
KFNDLRQKGCNLLGPQCVFSCAKENRVLPKQGFTCCLAMDGVKILASGFEMKEKDEIGKL
VTAMGGVLQTKASSDVSFVIVKNVLAAKYKWALNNLKKPIVSDSWLHRCWKEHRVVSHEP
YRTLPFSGLTISVTQVPLDERKEIEKLVQQNGGKYSAELTRKSTHLVCDAPEGDKYKVAK
RWGHIHIVSRTWFNQSVARRACLNEESYPVQKTSVTSTNSQRTSSKVVKNAEGSSYQEIS
CDGMVDADLEATLSQNMASTISDIPVPVSDDNTSTPPCVQHKTSFNIDACVAEDSQSEDN
DLYLLNCKIHLVGFDASEMRRLVNMVRRGGGSRYMSLNEQLTHIVVGSPSESEKKEVRSL
SAMGVINVVKTVWLEDCEREKKEISVLRRHAAYDLLLPKDSISYNKGSVNGIPGLKQGNP
STIQPAFSNDLSKSLSEGRQRTQHVISNKSQEKKSSVFIGRSFRFSSSFPDVQRGEIVDW
IHEGGGEVVDSQTKKIVDYTVEAHGVLCRPTQLTGATNVSPHWIRSCLQDGHLLDVRSHL
LFSPLQCKVPLPGFIGLQFCVSQYEEKDRELLRNLCHVLGGKLIKKLTKKVNYLICKFSE
GPKYEAACQWGMQTVTIEWIWECVKQNKVVSSSQFLPKEATASDRESGMCTMSQYPTQAV
RMISAPGESQLASQPREPVSKNARIADGISTRKEDKYAALCSKKPRLYEDGVTKGLLSSV
SVPITSVCTNIATENAVTENGAEVSKSVPDVASAIEDLLEQTSKIHDQMSPDRTATDKNV
SEQVFTSDCSRLGHDLHSEDPHSAFGLSKHWTGRSNEKDDISNPGKEENAGIYGNFSETQ
TESQVVSYEEDLSGRQMIIDRVRTRSGLTPNPN
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagacgacgttcaagggagcgaatgtgttcatgtccagaaacttggtggctcct
gagatattcgactcgcttcacgatgttctcaaagataacggagctgatattgttctatgt
tgtgatccttctaggaatggacctaatgatttccacataatctcctctcgagatcatgaa
aagttcaatgatctgcgccagaaaggttgtaatttgcttggtcctcaatgtgtgttttcc
tgtgcaaaagagaacagagtgctgccaaaacaaggattcacttgttgccttgcgatggat
ggagtaaaaatactggcatctggctttgaaatgaaggaaaaggatgagattggcaagtta
gtgactgctatgggaggtgtgctgcaaactaaagcatcatcagatgttagctttgtaatt
gtgaagaatgtactagcggcaaagtataagtgggctttgaacaatttgaagaaacctatc
gtctctgacagttggttgcaccggtgctggaaggagcatcgtgttgtttctcatgagcct
taccgaactcttccattttctgggttgacaattagtgtcacccaagttcctttagatgag
cgaaaggagatagaaaagcttgtccaacagaatgggggcaagtactctgctgaactcaca
agaaagagcactcatttagtttgtgatgctcctgaaggtgacaaatacaaggttgccaaa
agatggggtcacattcatattgttagcaggacatggtttaatcagtctgttgctagaaga
gcatgtctgaatgaggagtcatatcctgtccagaaaacctccgtcacatccacgaatagt
caaagaacttcctcaaaggttgtcaaaaatgcagagggcagttcctatcaagagatttca
tgtgacgggatggtagatgctgacctggaagcaactctctcccagaatatggcttctact
atttcagatattcctgtccctgtcagcgatgacaataccagtacaccaccttgcgtacag
cataaaacttcatttaacattgatgcatgtgttgctgaggactctcagtctgaagacaac
gatttgtatttgttaaactgtaaaattcatcttgttggttttgatgcttctgaaatgcgg
agattggtcaacatggtccgcagaggaggcgggtctcgttatatgtctctcaatgaacaa
ttaacacacattgttgttggatctccttcagaaagtgagaagaaagaagtaagaagcctt
tctgccatgggtgtcatcaatgtggtaaaaacagtatggcttgaggattgtgaacgtgaa
aagaaagaaatttcggtacttcggagacatgctgcttatgatttgctcctcccaaaagat
tccatatcctataataaggggtctgtaaacggcatacctggtctgaaacaagggaacccc
tcaaccattcaaccggccttttcaaatgatctgtccaaaagtttgagtgagggccgacag
agaacgcagcatgttatcagcaacaaaagccaggaaaaaaaatcaagtgtatttataggc
cgatcatttcgcttttccagttcattcccagatgttcaaagaggtgaaattgtggattgg
attcatgaagggggcggtgaggtggtggattctcagaccaagaaaattgttgattacaca
gttgaagcccatggtgttctatgcagaccaacacaattaactggtgctactaatgtatcc
cctcactggattcggtcatgtttacaggatggacacttgctagatgttcgcagtcacctt
ctcttttctccacttcagtgcaaagttccattacctggatttatcgggcttcagttctgt
gtatcccagtacgaggagaaggatagagagctattaagaaacttatgccatgttcttgga
ggaaaattaattaaaaagttgaccaaaaaagtcaactatctaatatgcaaattctccgaa
ggcccaaaatatgaggctgcttgtcaatgggggatgcaaaccgttacaatcgagtggatc
tgggagtgtgttaaacagaacaaagtcgtttcttcgagtcaatttctgccaaaagaagca
accgcgagtgaccgagaatccgggatgtgcaccatgagccagtacccaactcaagcagtt
cgaatgatttccgcacctggtgaatctcaactagcaagtcaaccacgggaacccgtaagt
aagaatgcccggattgctgatggtatcagcacaaggaaggaggacaaatatgcagctttg
tgcagtaaaaaaccaagactatacgaagatggtgtcacgaaaggtctactatcttctgtt
tcagttcccataacttccgtctgcacgaatatcgctactgaaaatgcggttactgaaaat
ggcgcggaggtttccaagtcggtccctgatgttgcatctgctatcgaggatttgttagag
cagacaagcaagattcatgatcagatgtcaccagatagaacagcaaccgataaaaacgta
tctgagcaggtgtttacgtccgattgttcaaggcttgggcatgatcttcatagtgaggat
cctcattcggcatttggattgtctaagcactggactggaaggtctaatgaaaaggatgac
atcagcaaccctggaaaagaagaaaatgccggcatttatggaaattttagtgaaacacaa
acagaatctcaggtggtgagctatgaagaagatttatctgggaggcagatgattatagac
agagttcgaacacgaagtggcctcacccccaacccaaactga
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