Helianthus annuus (common sunflower): 110916010
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Entry
110916010 CDS
T05101
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
han03016
]
110916010
Enzymes [BR:
han01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
110916010
Transfer RNA biogenesis [BR:
han03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
110916010
Prokaryotic type
110916010
BRITE hierarchy
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GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
110916010
NCBI-ProteinID:
XP_035841908
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Position
16:7448485..7457827
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AA seq
846 aa
AA seq
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MNTIFSKIPIKKSVLSSYPLFTCLSSNKPHSYNSKSFSSLKQSDTKESSLMKMKDESKKR
AECKDKSGPKDQKSKSRRLNPVNTTSYVQILGTGMDTQDTSPSVLLFFDNMRIVFNAGEG
LQRFCTEHKIKMSKIDHIFLSRVCSETAGGLPGLLLTLAGTGEKGLYVNVWGPSDLKYFV
DAMKSFVPNAATVHTRCFDASFKSDMVLVDTDTENVSDQIKLIHDKVVKISAVLLQPETR
TRKEDEFAIKCSDVSVLYVCELPEIRGKFDPDKAKALGLKPGPKYRELQEGISVKSDLQD
IMVHPDDVLGPSIPGPIVLLVDCPTLSHFQKILSTHYLENYYADKAEGKHKIVNCVIHLS
PSSVVNSSDYQKWMSRFCGAEHILAGHQKKNIEISVLQSSARVAARLNYLCPQFFPAPGF
WSPEQPNRSNDVSDLNFCKTVSAENLLKFHLRPYAQLGLDRSCIPIKAGPEEIINDLISE
IPEISDAAKHVSQLWEGDEELWVNQNVVSRCLKNITRENVEIVLLGTGSSQPSKYRNVSS
IFINLFSKGSLLLDCGEGTLGQLKRRFGIQGADNAVKRLKCIWISHIHADHHTGLARILI
LRRDLLKGLPHEPLIVIGPEQLKGFLDAYEKLEDLDMQFLDCSLTTQTSLASFESNYNNR
LNSYPILKNLKNVIGDAGLENVISFRVEHCKEAFGVVLKGTDRIDSDGGVIPGWKIVYSG
DTRPCSALVEASRGATVLIHEATFEDALEKEATAKNHSTTSEAIETGNAAGAYRIILTHF
SQRYPKIPVFDESHMHKTCIAFDMMSVNFADLHVLPRVLPYLKLLFKNETNVDECEDVED
AVTLAA
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaatcttcagcaaaatccccataaaaaaatccgttctttcttcttacccttta
ttcacttgcctttcatcaaacaaaccgcacagttacaattcaaaatctttcagttctttg
aagcaaagtgacacaaaggagtcatctttgatgaagatgaaggatgaaagcaagaaaagg
gctgagtgtaaagataagagtgggcccaaagaccaaaagtcaaaatctagaagacttaat
cctgttaataccacttcttatgttcagattttaggaacaggaatggatactcaagacaca
tcaccatcagttttgctcttctttgataatatgagaattgtattcaatgcaggagaagga
ctacaacgattttgtacagaacataagattaagatgtcaaagatcgatcacatatttctt
tcacgcgtttgctctgaaacggctggtggattaccaggtcttttattgacattagctggc
actggtgaaaaagggttatatgtaaatgtatggggaccgtcggatcttaaatatttcgtt
gacgcaatgaaatctttcgttccaaatgcagccactgttcacacacgatgctttgatgca
tcattcaaatctgatatggttttagtggatacagataccgaaaacgtaagtgatcaaatt
aaacttattcatgataaagttgtcaaaatatcggctgtgttgttgcaacctgaaacccgc
acgcgtaaagaagatgagtttgcaataaagtgtagtgatgtttctgttctatatgtttgt
gagttgccggagatcaggggtaaatttgacccggataaggccaaagcacttggattaaag
cccgggcccaaataccgtgaactacaagaaggaatatctgtgaaatccgatttacaagat
atcatggttcatcccgacgatgtacttggaccttcgattcccgggcccattgttctcctt
gtagattgcccaacactctctcattttcaaaaaatattatccacgcattatctcgagaat
tattacgccgataaagcggaaggaaaacacaaaattgtcaattgtgtaattcacttaagt
ccatcatcggttgtaaactctagtgattatcaaaagtggatgtcaagattttgtggtgcc
gaacatattctggcagggcatcaaaagaagaatatcgagatatcagttttgcaatctagt
gcaagagttgcagctcggctgaattatttatgccctcagtttttcccagctccaggtttt
tggtctcctgaacaaccgaatcgttcaaatgatgtttctgatctaaatttttgcaagact
gtttctgccgaaaatcttctcaagtttcatttgcgtccttatgcacaacttggattagac
cgatcttgtataccgattaaagcaggccccgaagaaatcattaacgacctaatttcggaa
attccagaaatttcggatgctgctaagcacgtttctcagctttgggaaggtgatgaagaa
ctttgggtgaatcaaaacgttgtttctagatgtttgaaaaatataacaagagaaaatgtc
gaaattgtccttctcggaaccggttcatctcaaccgtctaagtatcgaaacgttagttct
atcttcatcaatcttttctctaaaggtagtttactactagattgcggtgaaggaacactc
ggtcagctaaaaagaagatttggtattcaaggcgcagataatgccgtcaaacgtttaaag
tgcatttggatttcacatattcacgcagatcaccacacgggtttagcaagaatacttatt
ctgagacgtgacttgctaaaggggttacctcacgaacctttaatcgttattgggcctgaa
caacttaaaggattcctagatgcatacgaaaaactcgaagatttagatatgcagtttctt
gattgtagccttacgacacaaacgtctttagcttcttttgaatcaaactataataaccga
ctaaatagttatccgattctcaagaatttgaaaaatgtgattggtgatgcgggcttagaa
aacgtgattagttttcgtgttgaacattgcaaggaagcgtttggggtggttttgaagggt
acggatagaattgatagtgacgggggagttatacccgggtggaagattgtatattcgggt
gacactcgaccgtgttctgcgttagtggaagcttctagaggagcaactgttttgatacac
gaggcgacttttgaggatgctttagagaaagaagcaacagcaaaaaaccacagtacaaca
tcagaagcaattgaaacggggaacgctgcaggagcgtatcgaatcattcttacacatttc
agtcaaagatacccaaagattccggtatttgacgaaagtcacatgcataaaacatgcata
gcttttgatatgatgagcgttaactttgcggatttacatgtgcttccaagagtacttccg
taccttaaactgctgtttaaaaatgaaacgaacgtggatgaatgcgaggatgttgaggat
gctgttactctggctgcttga
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