Helianthus annuus (common sunflower): 110916103
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Entry
110916103 CDS
T05101
Name
(RefSeq) ATP-dependent helicase BRM isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110916103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110916103
03036 Chromosome and associated proteins [BR:
han03036
]
110916103
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110916103
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
110916103
Chromatin remodeling factors
BAF complex
110916103
PBAF complex
110916103
GBAF(ncBAF) complex
110916103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
HDA2-3
Bromodomain
AAA_14
DUF2996
Motif
Other DBs
NCBI-GeneID:
110916103
NCBI-ProteinID:
XP_022016553
LinkDB
All DBs
Position
16:complement(171233771..171244684)
Genome browser
AA seq
2154 aa
AA seq
DB search
MQSGGGAQQGGGGGHGRSNVVAGPPSAAASPSSSSSAVSRPNLGFDPMKHQQQQHMQALQ
QQLLRNPEGREAILAYQAGIRQGGLGGGVASGSSAMQQMQRVSQQHGQEEGQSGRLGFDQ
HMMNPMQQAYMQYALHAQQAQQKSSSGMQAQQQMKMGVMGKDQELNMGNARLQDAFAFQA
QVLSSKKPSDQFGHGGKQVMEENNQAVSDQSQSESQGQSRIQNQKHFGVPTSFGQVIPGS
NLGPMQAAQAQQGMHNMGNSQVAMAAQMQAMQALALERNIDLSLPQNANLMAQLMPIMQS
RMLGQQKANESNMGPQSKQQVTSPQVANESSPHSDVSGHSGSTNARQAMSPGHIGSTQNA
PLVNNSSGGQGQQFSIHGRENQLAPRQPTVNGSGMSSMPPPQSPANMSQGGSDHFSKNTV
TGSESLPIQHARQQMNRSSSNNVGLDIPKPPTNFTKQQLHVLKAQILAFRRIKKGEKILP
RELLQAITPPPLEVQLQQINAPAGRNLMDSKNKDLQAVTSSAGMNNPKSETHEEKAIAGT
TANAQGTTVINETPSVSLPAKEEQRNPAIPTKQEHEVEHGNQRTSHVGEGPTDKGKAVAV
ASTNAVVSQSVNPSQTKDPGPSRKYHGPLFDFPFFTRKHDSFGSSMMLNNNNNLTLAYDV
KDLLVDEGVEVINKKKNESLKKINGLLAVNLERKKIRPDLVLRLQIEEKKLLLQDLQTRV
REEVDQQQQDIMAMPDRPYRKFVRLCERQRMELKRQVQAAQRAIRAKQLKIIFQWRKKLL
ESHWALRDARTSRNKGVAKYHEKMLREYFKNNDGDDRSKRMEALKNNDVERYREILMEQQ
NSVPSEAAERYEVLSSFLSQTEDYLNKLGGKITSAKNQQDAEEAANVASAAARAQGLSEE
EVRAAASCAREEVIIRNRFSEMNAPQDSSSVSKYYTLAHAVSERVIRQPSMLRKGTLRDY
QLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKSNYGPHLIIVPNAVLVN
WKSELHNWLPNVSCIYYVGNKDQRSKLFTQEVSKLKFNVLVTTYEFVMFDKTKLSRVDWK
YIVIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRK
VFHDWFSQPFQKEGAHNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKIS
IILKCKMSAIQGVIYDWIKATGTIRVDPEDEKRKVQKSSMYQAKTFKPLNNKIIELRKTC
NHPLLNYPFFNDLSKDFLVNSCGKLWVLDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQ
WRRLVYRRIDGTTSLEDRESAIVDFNSPDTDCFIFLLSIRAAGRGLNLQTADTVIIYDPD
PNPQNEEQAVARAHRIGQTREVKVIYMEAVVDKVSSHQKEDNFRNGGGVDSDDDLAGKDR
YIGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRSTLESLLRDEERYQETVHDV
PSLQEVNRMIARSEEEVELFDQMDEEDDWTDEMVRYDQVPKWLRAGTREVNATVARMSKK
PLKDSLYTDNIGVELSEMGSDVTHQRRARLKGKKYLNYAELDDIEEFSEASSEENVNAEE
EIGDSDDNDDETTATPIVDKRQLEEEDVPASVNRYEYNNGGPSGSTRQNHMLQEPGSSGS
SSDSRQLTPIPIPSNSSKRFGSLSALDSRPGPRSRRLNDDVEEGEIAMSGDSQMDLQQSG
SLNHDHDENEKLLQPKLKRKRSIRVRPRPAVVKPDNKSVDRSSLLRGQSSHLPFQPDRTS
HADRKGQADRKGQADRKLVQENNAYKHEQRQSSPSLKAKRTPPARKIAGQPTRTNPVSGP
SENTKEQFKERSDVKVKKGSGSFGGTMMTEAMQRRCKNVITKIQRRIDKEGQQIIPLLTD
LWKRTESPRSGAGNGLLDLRKIELRVDQVEYNEVTDLIADVQLMLKGGMQYFGFSHEVRS
EARKVHDLFFDIMKIAFPDTDFREARSALTFSGPMASSSPRGVPPIGQTKRPKPMNDPEP
EPSLPRRPLSRGSIPARETRFGNTSTGGAGPSHAQEEPRPISHPGELVICKKKRKDRAGP
VSSMGRGIRSPGQTRPSQSQTGGQQGNGSGSSFGWANPVKKMRTDAGKRRPSQP
NT seq
6465 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctggtggtggggcccagcagggaggtggtggtggccatggccgcagcaacgtg
gtggccggaccaccgtcagccgccgcatcgccgtcgtcttcgtcgtcggcggtgtctcgg
cctaatttagggtttgatccgatgaaacaccaacagcaacagcatatgcaggcattgcag
caacagttactaagaaaccctgaagggagagaagctatattagcatatcaagctggaatc
aggcagggaggattaggaggtggtgttgcttcgggttcgagcgcgatgcaacaaatgcaa
cgggtgtctcagcagcatggccaagaggaagggcaaagtggaagacttggttttgatcaa
cacatgatgaatccgatgcaacaggcgtatatgcagtatgcgcttcatgctcaacaagcg
caacagaagtcttcgtcgggtatgcaagcgcagcagcagatgaaaatgggagtgatgggg
aaagatcaagagttgaatatgggaaatgcaagattgcaggatgcctttgcatttcaggca
caggttttgtcttccaagaaaccttcagatcaatttgggcatggagggaagcaggttatg
gaggaaaacaatcaggcggtttctgatcaaagtcaaagtgagagtcaaggtcaaagtaga
attcaaaatcagaagcattttggtgttccgacatcgtttgggcaggtgataccagggagt
aatttgggaccgatgcaagctgcacaagctcaacagggtatgcataatatgggaaacagc
caggtggcaatggctgcacaaatgcaggcgatgcaggctttggctcttgagcgtaacatt
gatctttcgcttccgcaaaatgctaatctgatggcacaactaatgccgatcatgcagtct
aggatgcttgggcaacaaaaagccaacgaaagcaacatgggcccacagtcaaagcagcag
gtcacttcaccacaagtcgcaaatgaaagttctccccatagtgatgtatcgggtcattca
ggctctacaaatgcaaggcaggcaatgtcacctggccatatcgggtcaacccaaaatgcc
cccttggtcaacaattctagtggtggtcaaggtcaacagttttctattcatgggagggag
aaccagttggcacctaggcaacccactgttaacggtagtggtatgtcttctatgccgccc
ccacagtcacctgctaacatgagccagggtggttcagatcattttagcaaaaacacagta
actggttctgaatcgttgccgatacagcatgctagacagcaaatgaacaggtcttcatct
aataatgttggattggatataccaaaaccacccacgaactttacgaaacagcaacttcat
gttcttaaagcccaaattcttgcttttaggcgtataaagaaaggagagaaaattctgcct
cgggaattacttcaagctatcacaccgcctccacttgaagtgcagttgcagcagattaat
gcccctgctggtagaaatcttatggattcgaaaaacaaagatcttcaggctgtgacatcg
tctgctgggatgaataatccgaaaagcgaaacacatgaggagaaagcaattgcaggtaca
acagctaatgcacaaggtacaactgtaattaacgaaactccatcggtttctcttcctgcg
aaagaagaacagagaaatcctgcaattcctaccaaacaggaacatgaggtagaacatggg
aatcagagaacttctcatgtaggtgagggtcccacagacaaaggtaaggcggttgcggtt
gcatctaccaatgctgttgtctcgcaatcggtaaatccgtctcaaacgaaagatcccggt
ccttctagaaagtaccatggcccgctgtttgactttcctttcttcactcggaaacatgat
tcttttggatcgagtatgatgctcaacaacaataacaatctaactctagcatatgatgtg
aaggatctccttgttgacgaaggcgtagaagtgattaacaaaaagaaaaacgaaagttta
aaaaagatcaatggcttactagctgtaaatctggagagaaaaaagataaggccggatctt
gttttaaggttacagattgaagaaaagaaacttctactacaagatttacagacacgcgtg
agagaagaagttgatcagcaacagcaggatataatggctatgccagatagaccatatagg
aaatttgttcggttatgtgaacgccaacgaatggagctcaagagacaagtacaagctgct
caaagagccattagagcgaaacagctgaaaattattttccagtggcgtaagaagcttcta
gaatctcactgggctctccgcgatgcacggacttcacgtaacaagggtgttgctaagtat
catgagaagatgttgagggaatatttcaagaataacgatggggacgatcgtagtaaaaga
atggaagcgttgaaaaataatgatgttgagaggtatagagagattctcatggagcaacaa
aatagcgtccccagtgaggctgctgagagatacgaggttttatcttcgtttttatctcag
accgaagattatctcaataaacttggaggcaaaattacatccgccaagaatcaacaggat
gctgaggaggctgcgaatgttgcatctgcagctgcaagagctcagggtctatctgaagaa
gaagtgagggctgcagcatcttgtgcgagggaagaagttataataagaaaccgtttctct
gaaatgaatgcaccccaagatagttcatctgttagcaaatattatactcttgcacatgct
gtcagtgaaagggtcatacggcaaccctcaatgcttcgaaaaggaaccttacgtgactat
cagcttgttggattgcagtggatgctttcattgtataacaataaattgaatggtatattg
gctgatgaaatgggtctcgggaaaactgtccaggttatggctttgattgcttatctgatg
gagttcaaaagcaactatggcccacatcttataatcgttccaaatgctgttctggttaac
tggaagagtgagctgcataattggttaccaaacgtgtcctgtatctactacgtcggtaac
aaagatcagcggtcaaagttgtttacccaagaggtttccaaactgaaattcaatgtcctc
gtgacaacttacgaatttgtcatgtttgataaaacgaaactttctagagttgactggaaa
tatatagttattgacgaagcacaaagaatgaaggaccgagagtctgttttagcacgcgat
cttgacagatatcgatgccaaaggcggcttcttctcactgggacccccttacagaatgat
cttaaagagctctggtcattgttgaatctgctgcttcctgatgtgtttgacaatcgaaaa
gtgtttcatgattggttttcacagcctttccaaaaagaaggcgcgcacaatgctgaagat
gattggctcgaaaccgagaaaaaagttatcatcatacatcgacttcatcaaatcttggag
cctttcatgctcagacgtcgtgttgaagatgttgaaggttctcttcctccaaagatctcg
atcattttaaaatgtaaaatgtcagctatccaaggtgtgatatacgattggataaaagct
actggtactattcgggtcgacccagaagatgagaagcgcaaggttcaaaagagctcaatg
taccaagcgaaaacgttcaagcctttgaacaacaaaatcatagaactcaggaaaacgtgc
aaccatcctttgcttaactacccgttttttaacgatctgtcgaaagactttcttgttaat
tcatgtggcaagttatgggttcttgatagaatcttaataaagcttcaaagaacagggcat
cgcgtacttttatttagtacaatgacaaagctgttagatatcttggaggaatatttacag
tggcgtcgactcgtgtacagaagaattgatggtacaaccagcttggaagatcgcgagtca
gcaattgttgactttaacagcccggataccgattgttttatctttttactcagcattcgt
gcagctggacgaggtttaaatcttcaaacagctgacacagttatcatatacgaccccgac
ccaaacccgcaaaacgaggaacaagcggttgctagagctcatcgtatcggtcaaacacga
gaggtcaaagtcatttacatggaagctgttgttgataaagtttctagtcatcaaaaagag
gataatttcaggaacggaggtggtgttgactcggatgatgatctggcgggtaaagatcgt
tacataggatctattgagagcctgataagaaataatattcaacaatataagattgacatg
gctgatgaggtcataaatgctggacggtttgaccaaagaaccacacatgaagaaagacgg
tcaaccttggaatcattgttacgtgatgaagaaagatatcaagaaactgttcatgacgtc
ccgtcacttcaagaagtcaaccgaatgatcgctaggagtgaagaagaagttgaacttttc
gatcaaatggatgaagaagatgactggacggatgagatggtacgatacgatcaagttcct
aaatggctccgtgcgggtactcgagaagtcaatgctactgtcgccagaatgtctaaaaag
cccctgaaggacagcttatacaccgataacatcggtgtggaattaagtgaaatgggttca
gatgttacacatcaaagaagggcgcgtcttaaaggaaagaagtatctgaattatgctgag
ctggacgacatagaggaattctctgaggcttcatctgaagagaatgtgaatgcggaggaa
gaaatcggggattctgatgataatgatgatgaaactacagctacacctatagttgataaa
cgtcaattagaagaagaggatgttcctgcttctgttaataggtatgagtataataatggt
ggaccgtctggttctactcgacaaaatcatatgcttcaagaaccaggttcttcaggatca
tcttcagatagtagacagttaacaccaataccaattccttctaattcttccaagagattc
gggtcactttctgcgttagattctcggcccggtcctcgttccagaagactgaatgatgat
gtagaagaaggtgagattgctatgtctggagattcacaaatggacctccaacaatccggt
agtttgaaccatgatcacgatgaaaatgaaaaacttttgcaaccgaaattaaaacgcaaa
cgtagcattcgtgttcgaccacggcctgctgtggtgaagccggataacaagtctgttgac
cggtcatctctccttcgtggtcagtcctctcatctgccttttcaaccagatcggacatca
catgctgaccgaaaaggtcaggctgaccgaaaaggtcaggctgaccgaaagttggttcaa
gagaataacgcttacaagcatgaacagaggcagagcagcccctcattgaaggctaaacgt
actccccctgcccggaaaattgccgggcaaccaacaagaacaaatcccgtatccggtcct
tcagaaaacactaaggagcagtttaaagaaagatcggatgttaaagtaaagaaaggaagc
gggtcttttggtggaactatgatgactgaggctatgcaaagaaggtgcaaaaatgtaatc
accaagatccagaggagaatcgacaaagaaggtcaacaaattattccgttgctaactgat
ttatggaagagaactgaaagtcccaggagcggtgcgggaaacggtcttcttgatctaaga
aagattgagctgcgagttgaccaagtggagtacaatgaagttactgatctgattgctgat
gtgcaacttatgctaaaaggcggcatgcagtatttcggattttcccatgaggtgaggtct
gaagcgaggaaggtgcacgatctgttttttgatataatgaaaattgcgtttcccgataca
gacttccgagaagccaggagtgcactcactttctctggcccaatggcatcctcgtctcct
agaggggtaccacctattggtcaaaccaagagaccaaaaccgatgaatgacccagagccc
gaaccaagtctcccccggagaccgctttctcgtgggtccatccctgctagagaaacacgg
ttcggaaacaccagcaccgggggtgcgggtccgtctcatgctcaggaagaacctagaccg
atctcccatccgggtgagctagttatctgcaagaagaaaagaaaagacagagctggtcct
gtttcgtctatgggtcgcgggatcaggagtccgggtcaaactagaccgagtcaaagtcaa
acgggtggtcagcagggaaatgggagtggatctagctttggttgggctaaccctgttaaa
aaaatgaggacagatgcagggaaaagaaggcccagtcaaccatga
DBGET
integrated database retrieval system
