Helianthus annuus (common sunflower): 110917102
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Entry
110917102 CDS
T05101
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110917102
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110917102
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
110917102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
Prok-RING_1
zf-RING_16
UstYa
DUF2561
RTA1
ABHD16_N
Motif
Other DBs
NCBI-GeneID:
110917102
NCBI-ProteinID:
XP_022017413
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Position
16:167313862..167315291
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AA seq
345 aa
AA seq
DB search
MDTLPPPPPPPPFSVITTPTPTSYTPIPQLYYNDTVSHHHHSSPPTPSIIIVMIIISSAI
IISATIYLLIRFLTRRCNRSFSTFSPADDVVSNNRNDSNESNETEHVRHHVISITNNALD
SLPLFTFSSLTGKIAGGDCAVCLSKFESSDQLRLLPLCCHAFHAQCIDAWLKSNMTCPLC
RSTVNPNEEDIMNTLTSGNGGSRRAGGNRSNSFRIEIGTISQRRDPANSDRRSYSVGSYD
YVLDDGYEIPVESTHRSVVSDCTSGDKDSTAEAPGESLAAEVAAGGSGRFNWLRDYVDRV
SVSLRGSGRFFTGSSRRSEAVSDFDGGHGRIGEEISELFRWLSGV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggacaccctaccacctccacctccaccaccaccattctccgtcataaccacccccacc
cccacctcatacacccccattcctcaactttactacaacgacacagtatcacaccaccac
cactcatcacctccaacaccttcaataataatcgtaatgattattatatcttccgccatt
attatctccgccactatttacctcctcatccgcttcctcacacgccgctgcaaccgttca
ttcagtacattttcaccagccgacgacgtcgtttccaataacagaaacgatagtaacgaa
agtaacgaaaccgaacacgtgcgtcatcatgtgatctccataactaacaatgcactcgac
tccttaccgcttttcaccttctcttcactcaccggaaaaatcgccggaggcgactgtgcc
gtttgtttatcgaagtttgaaagttcagatcagctccggcttcttccgttatgttgtcac
gcgtttcacgcgcagtgtattgacgcgtggcttaagtctaacatgacgtgtccgctctgc
cggtctactgtaaaccctaacgaagaagatattatgaatacgttgacttccggcaacggc
ggtagtcgtagagctggtggaaacaggagtaacagtttccgaatcgagatcgggactatt
agtcaacggcgagatccggcgaattctgaccggaggtcatactccgtcggttcgtatgat
tacgtgctggacgacggttacgagattccggtggagtcgacgcaccggagtgttgtttcc
gattgtacttccggcgataaggattcaacggcggaagcgccgggagagagtttggccgcg
gaggttgctgccggtggtagtggacggtttaattggttgcgtgattacgtggatcgtgtt
tcggtttcgttacgtggttctggaaggttctttaccggaagtagtcgccggagtgaggcg
gttagcgattttgacggaggtcatgggagaatcggtgaagagatcagtgaacttttccgg
tggctttcaggggtataa
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