Helianthus annuus (common sunflower): 110918467
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Entry
110918467 CDS
T05101
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03030
DNA replication
han03410
Base excision repair
han03420
Nucleotide excision repair
han03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110918467
03410 Base excision repair
110918467
03420 Nucleotide excision repair
110918467
03430 Mismatch repair
110918467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
han03032
]
110918467
03400 DNA repair and recombination proteins [BR:
han03400
]
110918467
DNA replication proteins [BR:
han03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110918467
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110918467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
Rad17
AAA_22
RCF1-5-like_lid
PTCB-BRCT
AAA_30
AAA_19
AAA_5
AAA_18
AAA_assoc_2
BRCT_2
AAA_24
RuvB_N
nSTAND3
AAA_14
Zeta_toxin
DNAX_ATPase_lid
Gp44_lid
AAA_28
AAA_2
NTPase_1
SurA_N
Motif
Other DBs
NCBI-GeneID:
110918467
NCBI-ProteinID:
XP_022018467
LinkDB
All DBs
Position
16:complement(183025733..183033332)
Genome browser
AA seq
1000 aa
AA seq
DB search
MQGDIRKWFMKQHDKDKDKEKEKDNGNAPKPAKPALAIPGKTSTAKDTSSSSPVKSVQGG
QESSGRRKTSKYFASEKQNQEDAKEASGPTSKRKVEKSSSNAQPSPAKKLHKVNDDDDDD
DFVLPKTGKSSAETTPSKKLKSGSGKGVPSPSMKEESDDDTPVISKSSGRGRGRRGGAAG
GRGKKLEDDEGGDGDDEDAKEVKSGGRGRGGRGGSAAAGGRGGGRGGFMPFGERKDPPHK
GEKEVPEGSPECLSGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTTYLLCDEDI
GGRKSETAKKLGTKFLTEDGLFDMIRASNRSKVTKKEETKKPVTVKEETKKPVIVKEETE
KQVDKITASVPKPSPQKAVKKKDEVRKPTDSLPWTEKYKPKVLTDIIGNQSLVKQLHDWL
KNWDANFLSGASKGKGKKPNDSGAKKAILLSGTPGIGKTTSAKLVSKMLGFQTIEVNASD
SRGKADSKIEKGIGSSTANSIKELVSNQSLNADMNSSKHPKAVLIMDEVDGMSAGDRGGV
ADLILSIKTSKIPIICICNDRYSQKLKSLVNYCLLLSFHKPTKQQMAKRLAQVAKTEGLQ
VNEVALEELASRVNGDMRMALNQLQYMSLSMREIKYDDIRQRLLNSSKDEDMSPFTAVQK
LFDYNGGNLRMDERFDLSTSDPDLVPLIIQENYINYRPSSVKKDENGVQRMNLIARAADS
IANADIINVQIRRYQKWQLFPSSTLQSSIIPAALLHGSRETLEQGERNFNRFGGWLGKNS
TMGKNYRLLDDVHVHLLSSLQFNLGRRTLCLEYLSLLLKHMTDPLKTLTKDEAVEKVVEF
MDEYSISQEDFESLMAMSKFQGRPNPLDGVPPAVKAALTKAYNKGSKSRVIRSADLITLP
GIKKAPKKRVAAMLEPIDDGVVADADVAQNDENNSDAEDLGDGDEEKPKVDIESLSSKGI
QLQMESKATGTKRAPAGRGRGGGGRGGAGGAGASSSKRKR
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggggatattagaaagtggttcatgaaacaacacgacaaagacaaagacaaagaa
aaagagaaagataacggaaatgcaccaaaacctgcaaaaccagcactcgcgataccaggg
aaaacatcaactgccaaagacacatcctcgtcttcacctgtgaaatcagtacaaggaggt
caagaaagttcagggagacgtaaaactagtaaatattttgcttccgaaaaacaaaatcaa
gaagatgcaaaagaagcatctggacccacatcaaaacgaaaggtggagaagtcatcttct
aatgcacaaccgtcacctgcaaagaagctgcacaaagtgaatgacgacgacgacgatgat
gattttgttttacccaaaaccggaaaaagctcagccgaaacgactcccagtaagaaactg
aaaagcggttccggtaaaggcgttcccagtccaagtatgaaagaagaaagcgatgacgac
actccagtaatttctaaatccagcggaagaggtcgcggtagaaggggaggggcggctggc
ggcagagggaaaaagttggaggatgacgagggcggtgatggtgatgacgaggatgctaaa
gaggtcaagtctggtggccgtggtcgtggtggaaggggtggttcggcggcggcaggtgga
agaggtggtggacgtggtggatttatgccgttcggtgaacggaaagatcctcctcacaaa
ggagaaaaggaagttccggaaggttctcctgaatgtttatctggtttgacttttgtcatc
agtggaacactcgacagtctggaaagagaagaagctgaggatctgattaaacgacatgga
ggccgtgttaccggatccgtcagcaagaaaacgacgtatctcttatgcgatgaagatatt
gggggacggaaatcagaaactgcaaaaaagctcggcacaaagtttcttaccgaggacgga
ctttttgacatgattcgtgcatcaaatcgctcaaaagtcaccaagaaagaagaaacgaag
aaaccggtcaccgttaaagaagaaacgaagaaaccggtcatcgttaaagaagaaacggag
aaacaagtggacaaaataaccgcttctgtaccgaaaccaagtcctcaaaaagcagtaaaa
aagaaggatgaagttcgtaaaccaaccgattcactgccgtggacagagaaatacaaaccg
aaagttctaactgatattatagggaatcagtcactggtgaagcagcttcatgattggctg
aaaaactgggatgcgaattttctgagcggtgctagtaagggaaagggtaaaaagccgaac
gactcaggggcaaaaaaggcaattttattaagtggtacacctggcatagggaagactaca
tctgcaaagttagttagtaaaatgctcggtttccagaccattgaggttaacgctagtgac
agtcgcggaaaggctgattcgaaaatagaaaaaggaatcggtagtagcacggctaattct
ataaaagaacttgtcagtaatcaatctttgaatgccgacatgaatagctcaaagcatcca
aaggcagtgctgattatggatgaagttgacggtatgtctgccggagacaggggtggtgta
gcagatcttatcttaagtatcaaaacgtcgaaaatcccgattatttgtatatgcaatgac
cgatatagtcagaagttaaaaagtcttgtgaattactgtttactcctcagcttccacaaa
ccaacaaaacaacagatggcaaagagattggcacaagttgcaaagacagaaggccttcaa
gtaaacgaggttgcacttgaggaacttgcttctagagttaatggagatatgcgtatggcg
ttgaaccagttgcaatatatgagtctatcgatgagagaaattaaatacgatgacataaga
cagcgacttcttaacagttctaaagatgaagatatgtctccttttacagcagttcaaaaa
ctgtttgattacaatggtggtaacctgcggatggatgaacgtttcgatcttagcacaagt
gatccagatttagtacctcttatcatacaggaaaactacatcaattacaggccaagttcg
gttaagaaagacgaaaatggagtccaaaggatgaatttaatcgcacgtgcggctgattct
attgcgaacgcggatataattaatgtacaaataagaagataccaaaagtggcagcttttt
ccaagtagtactttacaatctagtataatcccggctgctctgctgcatggaagccgcgaa
acattagaacagggtgaaaggaactttaacagatttggcggttggttaggaaagaactct
acgatgggaaagaattacaggctactcgacgatgtgcatgttcatctgctatcgtcccta
cagttcaatttgggcaggagaaccttgtgtcttgaatatctctcccttctccttaaacac
atgacggatccactaaagacgctcacaaaggatgaagctgttgaaaaggtggttgagttt
atggatgagtactctataagccaggaggactttgagtcactaatggccatgtcgaaattt
caggggcgcccaaatccacttgatggtgttccgccagctgtaaaagccgcgctaacaaag
gcatataacaaaggaagtaagtcgcgtgtgattcgttcagcagatttaatcacacttcca
ggtattaaaaaggctccgaagaaacgggttgccgccatgctggaaccgatagatgatggt
gtggtggcggatgctgatgttgcacagaatgatgaaaacaactcggatgcagaggatctg
ggtgatggtgacgaggaaaagccaaaagtggatattgagagtctcagttcgaaaggaatt
caactacaaatggagtctaaggctacgggcacgaagcgggcccctgcaggtagaggaaga
ggtggcggtggtcgtggtggtgctggtggtgctggtgcaagttcttcgaagcgaaaaagg
tga
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