KEGG   Helianthus annuus (common sunflower): 110918467
Entry
110918467         CDS       T05101                                 
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03030  DNA replication
han03410  Base excision repair
han03420  Nucleotide excision repair
han03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110918467
   03410 Base excision repair
    110918467
   03420 Nucleotide excision repair
    110918467
   03430 Mismatch repair
    110918467
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:han03032]
    110918467
   03400 DNA repair and recombination proteins [BR:han03400]
    110918467
DNA replication proteins [BR:han03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110918467
DNA repair and recombination proteins [BR:han03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110918467
SSDB
Motif
Pfam: RFC1 BRCT AAA AAA_lid_RFC1 Rad17 AAA_22 RCF1-5-like_lid PTCB-BRCT AAA_30 AAA_19 AAA_5 AAA_18 AAA_assoc_2 BRCT_2 AAA_24 RuvB_N nSTAND3 AAA_14 Zeta_toxin DNAX_ATPase_lid Gp44_lid AAA_28 AAA_2 NTPase_1 SurA_N
Other DBs
NCBI-GeneID: 110918467
NCBI-ProteinID: XP_022018467
LinkDB
Position
16:complement(183025733..183033332)
AA seq 1000 aa
MQGDIRKWFMKQHDKDKDKEKEKDNGNAPKPAKPALAIPGKTSTAKDTSSSSPVKSVQGG
QESSGRRKTSKYFASEKQNQEDAKEASGPTSKRKVEKSSSNAQPSPAKKLHKVNDDDDDD
DFVLPKTGKSSAETTPSKKLKSGSGKGVPSPSMKEESDDDTPVISKSSGRGRGRRGGAAG
GRGKKLEDDEGGDGDDEDAKEVKSGGRGRGGRGGSAAAGGRGGGRGGFMPFGERKDPPHK
GEKEVPEGSPECLSGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTTYLLCDEDI
GGRKSETAKKLGTKFLTEDGLFDMIRASNRSKVTKKEETKKPVTVKEETKKPVIVKEETE
KQVDKITASVPKPSPQKAVKKKDEVRKPTDSLPWTEKYKPKVLTDIIGNQSLVKQLHDWL
KNWDANFLSGASKGKGKKPNDSGAKKAILLSGTPGIGKTTSAKLVSKMLGFQTIEVNASD
SRGKADSKIEKGIGSSTANSIKELVSNQSLNADMNSSKHPKAVLIMDEVDGMSAGDRGGV
ADLILSIKTSKIPIICICNDRYSQKLKSLVNYCLLLSFHKPTKQQMAKRLAQVAKTEGLQ
VNEVALEELASRVNGDMRMALNQLQYMSLSMREIKYDDIRQRLLNSSKDEDMSPFTAVQK
LFDYNGGNLRMDERFDLSTSDPDLVPLIIQENYINYRPSSVKKDENGVQRMNLIARAADS
IANADIINVQIRRYQKWQLFPSSTLQSSIIPAALLHGSRETLEQGERNFNRFGGWLGKNS
TMGKNYRLLDDVHVHLLSSLQFNLGRRTLCLEYLSLLLKHMTDPLKTLTKDEAVEKVVEF
MDEYSISQEDFESLMAMSKFQGRPNPLDGVPPAVKAALTKAYNKGSKSRVIRSADLITLP
GIKKAPKKRVAAMLEPIDDGVVADADVAQNDENNSDAEDLGDGDEEKPKVDIESLSSKGI
QLQMESKATGTKRAPAGRGRGGGGRGGAGGAGASSSKRKR
NT seq 3003 nt   +upstreamnt  +downstreamnt
atgcaaggggatattagaaagtggttcatgaaacaacacgacaaagacaaagacaaagaa
aaagagaaagataacggaaatgcaccaaaacctgcaaaaccagcactcgcgataccaggg
aaaacatcaactgccaaagacacatcctcgtcttcacctgtgaaatcagtacaaggaggt
caagaaagttcagggagacgtaaaactagtaaatattttgcttccgaaaaacaaaatcaa
gaagatgcaaaagaagcatctggacccacatcaaaacgaaaggtggagaagtcatcttct
aatgcacaaccgtcacctgcaaagaagctgcacaaagtgaatgacgacgacgacgatgat
gattttgttttacccaaaaccggaaaaagctcagccgaaacgactcccagtaagaaactg
aaaagcggttccggtaaaggcgttcccagtccaagtatgaaagaagaaagcgatgacgac
actccagtaatttctaaatccagcggaagaggtcgcggtagaaggggaggggcggctggc
ggcagagggaaaaagttggaggatgacgagggcggtgatggtgatgacgaggatgctaaa
gaggtcaagtctggtggccgtggtcgtggtggaaggggtggttcggcggcggcaggtgga
agaggtggtggacgtggtggatttatgccgttcggtgaacggaaagatcctcctcacaaa
ggagaaaaggaagttccggaaggttctcctgaatgtttatctggtttgacttttgtcatc
agtggaacactcgacagtctggaaagagaagaagctgaggatctgattaaacgacatgga
ggccgtgttaccggatccgtcagcaagaaaacgacgtatctcttatgcgatgaagatatt
gggggacggaaatcagaaactgcaaaaaagctcggcacaaagtttcttaccgaggacgga
ctttttgacatgattcgtgcatcaaatcgctcaaaagtcaccaagaaagaagaaacgaag
aaaccggtcaccgttaaagaagaaacgaagaaaccggtcatcgttaaagaagaaacggag
aaacaagtggacaaaataaccgcttctgtaccgaaaccaagtcctcaaaaagcagtaaaa
aagaaggatgaagttcgtaaaccaaccgattcactgccgtggacagagaaatacaaaccg
aaagttctaactgatattatagggaatcagtcactggtgaagcagcttcatgattggctg
aaaaactgggatgcgaattttctgagcggtgctagtaagggaaagggtaaaaagccgaac
gactcaggggcaaaaaaggcaattttattaagtggtacacctggcatagggaagactaca
tctgcaaagttagttagtaaaatgctcggtttccagaccattgaggttaacgctagtgac
agtcgcggaaaggctgattcgaaaatagaaaaaggaatcggtagtagcacggctaattct
ataaaagaacttgtcagtaatcaatctttgaatgccgacatgaatagctcaaagcatcca
aaggcagtgctgattatggatgaagttgacggtatgtctgccggagacaggggtggtgta
gcagatcttatcttaagtatcaaaacgtcgaaaatcccgattatttgtatatgcaatgac
cgatatagtcagaagttaaaaagtcttgtgaattactgtttactcctcagcttccacaaa
ccaacaaaacaacagatggcaaagagattggcacaagttgcaaagacagaaggccttcaa
gtaaacgaggttgcacttgaggaacttgcttctagagttaatggagatatgcgtatggcg
ttgaaccagttgcaatatatgagtctatcgatgagagaaattaaatacgatgacataaga
cagcgacttcttaacagttctaaagatgaagatatgtctccttttacagcagttcaaaaa
ctgtttgattacaatggtggtaacctgcggatggatgaacgtttcgatcttagcacaagt
gatccagatttagtacctcttatcatacaggaaaactacatcaattacaggccaagttcg
gttaagaaagacgaaaatggagtccaaaggatgaatttaatcgcacgtgcggctgattct
attgcgaacgcggatataattaatgtacaaataagaagataccaaaagtggcagcttttt
ccaagtagtactttacaatctagtataatcccggctgctctgctgcatggaagccgcgaa
acattagaacagggtgaaaggaactttaacagatttggcggttggttaggaaagaactct
acgatgggaaagaattacaggctactcgacgatgtgcatgttcatctgctatcgtcccta
cagttcaatttgggcaggagaaccttgtgtcttgaatatctctcccttctccttaaacac
atgacggatccactaaagacgctcacaaaggatgaagctgttgaaaaggtggttgagttt
atggatgagtactctataagccaggaggactttgagtcactaatggccatgtcgaaattt
caggggcgcccaaatccacttgatggtgttccgccagctgtaaaagccgcgctaacaaag
gcatataacaaaggaagtaagtcgcgtgtgattcgttcagcagatttaatcacacttcca
ggtattaaaaaggctccgaagaaacgggttgccgccatgctggaaccgatagatgatggt
gtggtggcggatgctgatgttgcacagaatgatgaaaacaactcggatgcagaggatctg
ggtgatggtgacgaggaaaagccaaaagtggatattgagagtctcagttcgaaaggaatt
caactacaaatggagtctaaggctacgggcacgaagcgggcccctgcaggtagaggaaga
ggtggcggtggtcgtggtggtgctggtggtgctggtgcaagttcttcgaagcgaaaaagg
tga

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