Helianthus annuus (common sunflower): 110918775
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Entry
110918775 CDS
T05101
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03410
Base excision repair
han03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110918775
03450 Non-homologous end-joining
110918775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
han03400
]
110918775
Enzymes [BR:
han01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110918775
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
110918775
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
110918775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
NTP_transf_2
HHH_5
Motif
Other DBs
NCBI-GeneID:
110918775
NCBI-ProteinID:
XP_022018751
LinkDB
All DBs
Position
4:107867464..107873985
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AA seq
504 aa
AA seq
DB search
MAPKARSDPNGIFSGMVVFLVDNGVQRRRLQIWKQKLVQMGAIIVEEEEGLSRNVTHVFA
TDSASLGLKFRPKLLQRFKGAILLYQWLEDSLRLGEKVNEESYSIQLPNEPKSGDPQLHL
SKKLKTSPGPQIKDKSLNDSGSSPESPSSISPVNTDGQQTSVGAQNASLHYHPPDLNRNI
TEIFGKLINIYRALGDDRRSFSYYKAINVIERLPFNIESVDQVKDLPAIGKSMQDHVQEI
VTTGKLSKLEHFESDEKVRTISLFGEVWGIGPATALKLYERGHRSLDDLKNDATLTNSQR
LGLKYFEDIRTRIPRDEVQEMEHLLQRAAEDILPGVSVVCGGSFRRGKATCGDMDIIITH
PDGKSHIGFLPKYVNHLKGMNFLREDLVFSIHSEQGTDSGVDTYFGLCTYPGRELRHRID
LKVYPKDIYPFGLIHWTGNDVVNRRLRILAESKGFRLDDTGLFPATHGSGGKRVSGSTSL
KFNSEKEVFDFLGFPWLEPRERNI
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaggcaaggtcggatcctaatggaatattctctggaatggtcgtcttcctc
gtcgataacggcgtccagagacgtcgtctgcagatatggaagcaaaagcttgtacagatg
ggagcaatcatagtagaagaagaagaaggtttgtctcggaatgtcactcacgtcttcgca
actgattccgcctcacttggcctcaaatttcgccccaaactattacagcgcttcaaaggg
gccattcttctttatcagtggttggaggacagcttgaggcttggagagaaagttaacgaa
gaatcctacagtatacagttgcctaatgagccaaaatctggtgaccctcagttacacctt
tctaaaaagctgaaaacgtctcccggtccacaaatcaaggataaatccttgaatgattca
ggctcatccccggaaagcccttcaagcattagcccagtcaacactgatggtcaacagact
tctgttggtgcacaaaatgcttccttgcattatcatcctcctgatttaaatagaaatatt
actgaaatatttggcaagcttatcaatatatacagagctttgggtgatgatcggcggtcc
ttcagttattacaaggcgattaatgttattgaaagactgccgtttaacattgaaagtgtg
gatcaagtcaaagacttacccgctattgggaagtccatgcaggatcatgtacaagaaatt
gttacgactgggaaattgtccaagttggaacacttcgagagtgacgaaaaggtacgaaca
attagcttgtttggggaagtatgggggattggtccagcgactgcactgaaactgtatgaa
agaggacacaggagtcttgatgatttgaaaaatgatgccacactcacaaattcacagcgg
ttagggttgaagtattttgaagacatcagaactaggataccacgagatgaggtacaagag
atggagcatttgctacagagagctgcagaagatattttacctggagtgagtgttgtttgt
ggaggatcattcagacgtgggaaggctacttgcggggatatggacattataattacacat
cctgatgggaaaagccatataggttttctacccaagtatgtaaatcatttgaaaggcatg
aactttttgagagaggatttggtcttcagtattcacagcgagcagggtactgattccgga
gttgatacatactttggtctttgcacttatcctggtcgtgagctccggcatcgcattgat
ttgaaggtgtacccaaaggatatatatccttttgggcttatacattggacggggaatgat
gtggtgaacagaagactgagaatacttgcagaatccaaagggttccgactagatgataca
gggcttttccctgcaactcacggatctggtgggaaaagggtcagtggtagcacaagtttg
aagtttaactcagaaaaggaagtgtttgactttcttggatttccatggcttgaaccacga
gaacgcaatatttga
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