Helianthus annuus (common sunflower): 110919128
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Entry
110919128 CDS
T05101
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03030
DNA replication
han03420
Nucleotide excision repair
han03430
Mismatch repair
han03440
Homologous recombination
han03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110919128
03420 Nucleotide excision repair
110919128
03430 Mismatch repair
110919128
03440 Homologous recombination
110919128
03460 Fanconi anemia pathway
110919128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
han03000
]
110919128
03032 DNA replication proteins [BR:
han03032
]
110919128
03400 DNA repair and recombination proteins [BR:
han03400
]
110919128
Transcription factors [BR:
han03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110919128
DNA replication proteins [BR:
han03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110919128
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110919128
MMR (mismatch excision repair)
110919128
DSBR (double strand breaks repair)
HR (homologous recombination)
110919128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
DUF223
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
110919128
NCBI-ProteinID:
XP_022019102
LinkDB
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Position
2:complement(72907102..72910908)
Genome browser
AA seq
601 aa
AA seq
DB search
MTKSVSPDAISVIMSNPSPDSSTVLPEIVLQILDLKPAGNRYTFNVNDGKRKLKAILQAS
LSSEVINGNIQNLGLIRVIDYTLNDIPNKNEKFLIVIKCEAVSPALEAEFKVEVKTEGAG
ILLKPKQEVVTKSAAQIIYEQNRNMAPTARTSMTRRVHPLASLNPYQGNWTIKVRLTSKG
NMRHYKNARGQGCVFNVELTDEDGTQIQATMFNEAARKFFDVFEMGKVYYISKGTLKVAN
KQFKTVQNDYEMTLNENSQVEEAVNEAAFIPETKFNFVPIDQLGPYVNQKELIDVIGVVQ
SVSPTMSIRRKIDNESIPKRDITIADDTKKTVVVSLWNVLATDLGQKLLDMADESPVVAI
KSLRVSDFQGVSLSTVNKSIIEVNPNSPDSEKLKSWFQSEGKETNMESIGLNLSPSMKNG
GRSMYADRVTLNQITSNSSLGEEKPVWYSIRACMSMIRSDQAMYYQACKTCYKKVTEDVG
SGYWCQACQKNESDCSLRYILSAKFSDASGGAWLSVFSDEAEKLIGCSATELHNLKSQDD
GSEYETQLKKATWVPYLFRVMVAQKEYNNEKKQRITVKSIAHVDFAAESKFLLEEISTMK
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatcagtgagtccagatgcgatatcggttatcatgtcgaatcctagtccagat
tcctctactgttcttccggaaatcgttcttcaaatactcgatctcaagccagctggcaac
agatacacgtttaatgtgaatgatgggaagaggaagttgaaggctattttgcaagcaagt
ttgtcatctgaagtaatcaatggaaacattcaaaatttgggtctcattcgtgttattgat
tacactcttaatgacatcccaaacaagaatgaaaagttcttgattgtgataaaatgtgaa
gcggtttcgcctgcgttggaggcagagtttaaggtggaggtgaagactgaaggtgcaggc
attttgttgaagccaaagcaagaagttgttactaaatcagctgctcaaattatctatgaa
cagaacagaaacatggcacccactgcacggacttctatgactagacgggttcacccgttg
gcttccttaaacccgtatcaaggaaactggacgattaaagttcggctcacatccaaagga
aacatgcgccattacaagaatgcacgaggccaaggttgtgtcttcaatgtagaattaacc
gatgaagacggtactcaaattcaagcaaccatgttcaacgaggctgcaaggaagtttttc
gatgtgtttgaaatgggaaaagtttattacatatccaaagggactttaaaggttgctaac
aagcaattcaagaccgtacaaaacgattatgaaatgactctgaacgaaaattctcaagtg
gaagaagcagtcaacgaagcagcctttatccccgaaaccaagttcaactttgtcccgatt
gatcagttgggaccatacgtcaatcagaaggagcttattgatgtcattggtgtggtccaa
agtgtatcgccaaccatgagcattagaagaaaaatcgataacgagtccatcccaaaacgt
gacataactattgcagacgacacgaagaaaactgtagttgtatctttgtggaacgttctc
gccactgatcttggtcaaaaactattagacatggccgatgagtcgcctgtagttgcaatc
aaatctttacgcgtatctgatttccaaggggtatctttgtcaacggtgaacaaaagtatc
atagaagttaatcccaattctcctgattccgaaaaactaaaatcatggtttcaatccgaa
ggcaaagaaaccaacatggaatctatcggtttgaatttgagcccttcaatgaaaaatggc
ggtagatcaatgtacgccgatcgtgtgacactgaaccaaatcaccagcaactcatctttg
ggtgaagaaaagcctgtgtggtacagtatacgcgcttgtatgagtatgattagatccgat
caagccatgtattatcaagcttgcaaaacatgttacaaaaaggttactgaagatgttggt
tctggttactggtgtcaagcgtgccagaagaacgaaagcgactgcagtttgaggtatata
ttgtctgcaaagttttctgatgcaagtggtggagcttggttatctgttttcagtgatgaa
gctgagaaactaatcggttgctctgctaccgaactacataatttgaagtcacaggatgat
ggaagcgaatacgaaactcaacttaaaaaggcgacgtgggtcccatatcttttccgggtg
atggttgcacaaaaagagtacaacaacgagaaaaaacaaaggattacagtcaagtctatt
gctcacgttgattttgcagctgaatctaagtttttgctggaagagatatctacaatgaaa
gcttaa
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