Helianthus annuus (common sunflower): 110919976
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Entry
110919976 CDS
T05101
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110919976
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110919976
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Ig_DR_A0283-like
Motif
Other DBs
NCBI-GeneID:
110919976
NCBI-ProteinID:
XP_022019914
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All DBs
Position
2:complement(117269586..117274855)
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AA seq
647 aa
AA seq
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MAKSMGVKMHFRKHHVVIDNGIVQLTLTNPGGYVTGVKYNNIDNLLESQNDESDRGYWDL
VWSSPDNPGTTGTFERIEGTSCEVIIETEDQVELSFTRTWDSTLVGKHVPLKIDKRFVIL
RGSSGFYSYAIYEHLEGFPGFNLDETRIVFKLRKDKFHYMAMSDDRQRYMPLPDDRLPAR
GKPLAYPEAVLLVNPVEPEFKGQVDDKYQYSCETKDLKVHGWISTDPPVGFWQITPSNEF
RTGGPTKQELTSHVGPINLAMFISAHYGGNDLVVKFSEGELWKKVFGPVFMHLNTTSTGE
DPLTLWQDAKNQMLEEVGKWPYSFPASKDFQQVNERGVISGRLFVYDRFISDEQAPTNGA
YIGLAPPGDPGSWERENKGYQFWSKTNEQGCFSIEHILPGTYNLYAWVQGFIGDYKKPEA
ITITPGCDIEVGDLVYEPPRDGPTLWDIGIPDRSAAEFYIPDPDPMYTNQFLTDDPNRFR
QYGLWEQYATLYPDGDLVYTIGESDYRKDWFFAHVPRKKGDNVYEKTTWTIKFKLNNVNK
DETYKLRLALASAQVSDLQVRVNDLNTDSPLFSTGIIGGDNAIARHGIHGLSWLFNIDIP
GTLLISNEENTIYLTQANGGTPFRGVMYDYIRFEGSALSCSGSNTCI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagtatgggagtgaagatgcattttcggaagcaccatgtggttatcgataat
ggcattgttcaactcactctaacaaatccaggaggctacgttacaggcgtaaagtacaac
aacatcgacaatctacttgaaagccaaaacgatgaatctgatagagggtactgggatctt
gtttggagttcacccgacaatcctggaacaaccggtacttttgaaaggattgaaggaaca
agttgtgaagttataatcgaaaccgaagatcaagtagagctctcgtttacaagaacatgg
gattccacccttgtgggaaagcatgtcccattgaagatagacaaaaggttcgtgattctt
cgcggttcttctggtttctactcgtatgcaatctacgaacatttggagggatttcctggt
ttcaatcttgacgaaaccaggatagtgttcaagctcaggaaagacaagtttcactatatg
gcaatgtctgatgacagacaaaggtatatgcccctacccgatgatcggttacccgctaga
ggtaaaccattggcttatcctgaggcagtactccttgttaatcctgtggaaccagagttt
aaaggacaggtagacgataaatatcagtattcatgtgaaaccaaggatctaaaggtccat
gggtggatatctacagacccacctgttggattctggcaaattacaccaagtaacgagttc
agaacaggtgggcccacgaagcaagaacttacttctcatgtgggcccgataaatctagcc
atgtttatcagtgctcattatggtggaaacgatttagttgtcaaattttccgaaggggag
ctatggaagaaagttttcggcccggtttttatgcatctcaatacgacttctacaggagaa
gaccctcttacactttggcaagatgccaagaatcagatgctagaagaagttggaaaatgg
ccttatagttttccggcttcaaaggatttccaacaagttaatgaaaggggggtgataagc
ggtagattattcgtatacgacaggttcattagcgatgaacaagcacccacaaatggtgct
tacattggactagctccacctggagaccccggatcatgggaacgcgaaaacaagggctat
caattttggagtaaaaccaacgaacaaggatgtttttcgattgaacatattttgccgggc
acatataatctatacgcctgggtccaaggtttcattggagattacaaaaaacctgaggca
attaccatcacaccaggttgtgatatcgaagtcggggatcttgtttacgagcctcctaga
gacggtccgactttatgggatattgggatacccgaccgctctgcggccgaattctacatt
cctgatcctgacccaatgtataccaaccagtttctcaccgatgatcctaacaggtttagg
cagtatggattatgggaacaatatgctacgctataccccgatggtgatttggtttacaca
atcggtgaaagcgactacagaaaagattggttcttcgcacatgtaccgcggaagaaaggt
gacaatgtgtatgaaaaaacgacgtggactatcaagttcaagcttaacaatgtgaataag
gatgaaacttataaattaagattggctctagcatcagcacaagtatcggatcttcaggtt
cgagttaacgatctaaacacagattctcctctattttcaaccggaatcattggaggagac
aatgcgattgcaaggcatggaatacatggtctgagttggttattcaacatagatatacca
ggaacacttttgatctccaatgaagagaacacaatatatttgacacaagcaaatggagga
acccctttccgtggagtcatgtatgattacattcgttttgaaggatcagctctttcatgt
tctgggagtaatacatgcatttga
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