Helianthus annuus (common sunflower): 110920708
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Entry
110920708 CDS
T05101
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110920708
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110920708
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
TPR_17
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
ARM_TT21_5th
Beta-prop_WDR19_1st
TPR_19
Pex26
Motif
Other DBs
NCBI-GeneID:
110920708
NCBI-ProteinID:
XP_022020599
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Position
2:complement(114322850..114341300)
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AA seq
754 aa
AA seq
DB search
MESLCFHDGNITDFIDARTLHVRTDINRSLQLHSSFLRRLSLERELEGHRGCVNTIAWNS
SGSLLISGSDDTCINLWSYQSRKLLHSIDSGHTANIFCTKFVPETSDELVVSGAADAEVR
LFNLSRSGRRRVEDSTINPSALFQCHTRRIKKLAVEPGNPNLVWSASEDGTLRQHDFREC
TSCPPSESSHRECHNVLLDLRCGAKKSLADPPRQSLVLKSCDISSTRPHLLLVGGSDSFA
RLYDRRMLSPLSSGRNKQPPPPCVNYFCPMHLSDHGRQGLHLTHVTFSPNGEEILLNYSG
EHVYLMDVNPVQGSSMRYTSDDAMKFFNPTTILKEVQSKPPHSDFPNRVLAKRNLTASLD
QCRKLLQIAEKSLKEGANYYYGIEACNDVLHGHGQIGHTLILECLCLRAALFLKRDWKND
VHMAIRDCLRAVEIDPASFRALHCMSEALLQLGKLKEATDFVIAAQFAAPSNPEAVEIVE
SIKKRINTAEAGKPKEGGPSSEASRVLSLSDILYRSDASSDTSQPMSERENSDYEDDLEV
DFENSISGDESHDAESNNLYPTLKVRVHRERDSAKNTFHTSSSGGSPKSYSPTDKITRQH
ERAIDMKQRYVGHCNVGTDIKQASFLGQKGEYIAAGSDDGRWFIWEKSTGRLIKMLLGDG
AVVNCVQSHPFDCVVATSGIDNTIKIWTPLASVPSVVAGGAAGPDTANIIDTMEGNQRRL
SHNRESLLPFEILEGFRMHEFPEGSLRPFECIQS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgctctgctttcacgatggcaacatcaccgacttcattgatgctcgaactcta
cacgttcgcaccgatataaatcgcagtctgcagttgcattcatcattccttagaaggctt
tctctagaaagagagctggaggggcatcggggatgtgtaaacactattgcatggaactca
agtggctcactattgatatctggatctgatgacacttgtatcaatctttggagctatcaa
agccgcaaactcttgcattccattgacagtggtcataccgctaacatattttgtacgaaa
tttgttcctgaaacatctgatgagttggttgtatccggagctgctgatgctgaagttcga
ctattcaatttgtctcgctcaggaaggaggcgtgttgaagatagcactattaatccatca
gcactatttcaatgccacacccggagaattaaaaaattagctgtagaacctgggaatcca
aatttggtatggagtgccagcgaggatgggacattgagacaacatgattttagagagtgc
acttcttgtcccccttctgaatcttctcatcgagaatgtcacaatgtattgcttgatttg
cgatgtggagcaaagaaatcattagctgatccacctagacagtcacttgttctgaaatct
tgtgacatcagcagtaccaggcctcatttactgcttgttggtgggagcgactcatttgct
cgtttatacgatagacgcatgctttcaccactttcttctggccgcaacaaacaaccacca
cctccttgtgttaactacttctgcccaatgcatctttctgatcatgggcgacaaggttta
caccttactcatgttacatttagtccaaatggagaagagattcttctcaattatagcggt
gaacatgtctacttaatggatgtaaatcctgttcagggaagttctatgcggtacacatca
gatgatgcgatgaagtttttcaatccaactaccatactgaaggaggtgcaatctaaacca
ccacactctgatttcccaaatcgtgttcttgcaaagagaaacctcacagctagtcttgat
caatgccgtaaacttcttcaaattgcagagaagtctttaaaagagggagccaactattac
tacggtatcgaggcttgtaatgatgttttgcatggtcatggtcagattggacacacattg
atacttgaatgtttgtgtttacgagcagcgttgtttctgaagcgtgattggaaaaatgat
gttcatatggccataagagattgtcttagagctgtggaaattgatcccgcatcatttaga
gccctacactgcatgtctgaagctctattacagttgggtaaactcaaagaagctacggac
tttgttattgctgcccagtttgcagctccatctaatcctgaagctgttgagatagtggag
agtataaaaaaacgtatcaatacagcggaagctggcaagccaaaggaaggaggtcctagt
tctgaagctagtagagtattatctctgagtgacatactgtatagatcagatgcgagtagt
gatacttcacaacctatgtccgaaagagaaaattctgattacgaggacgatttggaagtt
gattttgaaaattcaatatcaggcgatgaaagccatgatgctgaatctaacaacttatac
ccaactcttaaagtcagagtccacagagaacgtgattcagcgaagaatactttccataca
agtagctccggtggatcaccaaaatcgtattctccaactgacaaaattactcgtcagcat
gagagggcaatagatatgaagcaaagatatgtgggtcattgtaatgtagggacagacatc
aaacaagccagttttcttgggcaaaaaggggagtacattgctgccggaagtgatgatggt
agatggtttatttgggaaaagagcactggcagactaattaaaatgcttcttggggatgga
gctgttgtgaactgtgtgcaaagtcatccatttgattgtgttgtagctactagtggcata
gataataccatcaagatttggaccccgcttgcttcagttccatctgtcgttgctggagga
gcagccggacctgacactgctaatattatagatacaatggaaggcaatcaacgcagatta
tcccataaccgtgaatcgttgttgccattcgagatattagaagggttccggatgcatgag
tttcctgaaggatcgttgcgcccgtttgagtgtatacagagttag
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integrated database retrieval system
