Helianthus annuus (common sunflower): 110920770
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Entry
110920770 CDS
T05101
Name
(RefSeq) uncharacterized protein LOC110920770 isoform X1
KO
K24155
rabconnectin-3a
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110920770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110920770
Membrane trafficking [BR:
han04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110920770
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
110920770
RAVE complex
110920770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WDR55
Beta-prop_WDR5
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
EIF3I
ANAPC4_WD40
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
110920770
NCBI-ProteinID:
XP_022020657
LinkDB
All DBs
Position
17:complement(158597916..158612877)
Genome browser
AA seq
2336 aa
AA seq
DB search
MHRRTPVAGTTTISTATHLNFPFPFQLIKSDTIPPAPTRPESTIDWLPDYLGHAWIAYAA
SSLLVISNFPSPSVTNGISGDPVFRQVIEVSSDGSGDVSAVSWSPGSMCCGEVAASLENC
IGVFSHNSEGSFCWSQTAILVHATNIEAIKWTGSGDGLISVGTDIVLWRKNVLSWEIAWK
FKPEFLQSLVSTTSTIEGPFATAPLNNDSPSVLICHGKSKCIKAELHHHVPVSMIQWRPL
VANEWKETPKHPLKLVLLTCCADGTVRLWSEIDDGRGRKTGKAHNDQRPLASTFRVAATI
EINQAVNGILGSNVFVRWATELDGIVNIGNEGSQYFPSEEYHLGKPGKCDWLICFGPQTL
ITFWAVHCIDDISPLRFPRVTLWKKCELPSCKTETSFPLHKSIISRNGFFGPPDVSSVIH
LLPSNHLTWSQFYKQTSSEDSVSAIANGSLNIDGHTGKILQIELHPSVSYPELAVSLDIN
GVILFWSFSNSAISLPLNDGCKLYGKFVARDSRCKYTNLRWAPAIIDDCKVLLMGHAAGI
DCFLVNVSQNEDFISCNKLCTIPFTPNGNENGPASIWSIPLTFNKFMVLAVRKGNFQALS
WKITIHPAEISFNETVETATYSFESDMSGKKYRILVDRCSSSFPNPYDHDNITSFATGMF
NDHVPYHMVTGCFDGSLKLWRSLDQEWELVGAVAAHAGPVTRVSVTDCGRKIATISNKDG
SNDHSTLHIWESVYVGDVGSFLLEESIHLDGTVVALNWLTIGNGQFLLGVSLRNELQVYS
MRRCEGESSVGSKKSKDRNVWFCLAKSQTGPTICDFVWGPKASCVIVHDDYFCLFSQWLL
PQSKKHMSNSGSDTRDVEKLTFKDGNETCVSNGVMRMNKENCIVSSVSENYEQKYDIFTD
IGLSSILEITADVGGSLPAYHPESLLVNIYSGNWKRAQSTLKHLLEHLSSNNVDLKRIPQ
MSLSDYIEGLFSEKSNNKASFTWDANINLDQFSYSSWDSNGSTNSTSTRSGLSGLAKLLE
KLHDILVITDTEKMQILAVVDLLEEISNSNASSPYGGLDESGRRFWVAVRFQQLYCARRV
GKLPLVGELTIDSALIAWAFHSDCLDSLFDSFLNNDSSWQEMRNMGIGYWYTNKSQLRVK
MERLAKQQYLKNKDPKACTLLYVALNRLQVLAGLYKISKDEKDKPLVAFLSRNFQDEKNK
AAALKNAYVLMGRHQLELAVAFFLLGGDTASAINVCTKTLGDEQLALVICRLIEGYNGPS
EHHLISKFLLPSAYENGDYWKSSILEWVLGNYSKAFTSMLGEQVTSPSDKPALLSNHAAF
NDSSVGQYCIMLANKNQTKNAIGERNTATLCRWAVLMSSTALSRCGLPVEALECLSSSVS
IFNGSEQKSVSDNSEIIILDERLNPSAYSANWVSGDAAFHVLSHAKYSFAMQYVTNLLTE
HPSWPQSVTPSSEIPYNALLSTFENKLNAALAYFEQKYSLTRYHLINMIIVSLYNHGLMF
IGSHMLQHERFALNRNPSYPTLPTLLLKGIEDFSFLFSKYNMVCMMNCCNTEPHSTQTNM
VTGNRGSRLSSCGIYMKDLLSLISKLKSGLKLVGDSYAECFLDLCEYYIYFTSAWFQKNP
KSVIFVLKPILLTYSNESVTFNSNMKIINDFLPKLSELLDHHEISVQTVGLTVNDENSHG
IPEKDKWQIIRASLCGLMSGFLKHQIDLLPENLEDNYSLAKLLKVESEHALSYCAKQLAS
FLLQKVKDQSNESTILWLENLCRSTPITNYRGLGQGVDFDFNLSRVLNNEEGLSTFEVLW
SMFDDEKMLCGDFAVEYSKWSQLIKQKHTKGWNDVYTSITGDHEPSENDDREAVDHSIDL
SVDHRDPDIKMKHSPFQKPKEVHKINGELLEALCINSIDQQQAAIACNKKGIIFYNWEDG
RSSFDKSNYIWTDVDWPTDGWAGSESTPVPTCVSPGIGLGSRKGTHLGLGGATIGVGLAK
PVSTSSLGWEIQQDFEELVDPPATVDNIRTRAFSSHPSRPFFLVGSSNTHVYLWEFGKNT
ATATYGVLPAANVPPPYALASISAVHFDHCGQRFATAASDGTVCTWQLEVGGRSNVRPTE
SSLCFNNYTSDVTYVTSSGSIVAAVGYSSNNVNVVIWDTLAPPTTSRASIMCHEGGARSI
CVFADEMGSGSVSPLIVTGGKGGDVGVHDFRYIATRRPKKHTNSDNDEQKFSASSTAGLH
NKHGDQNRNGMLWYIPKAHSGSVTRISAIPNTSFFLTGSKDGDVKLWDAKRAKLVYHWPK
MHDRHTFIQPSSRGFGGVVRFETLQAAVTDIQVVSNGFLSCGGDGSVKLVQLRDLL
NT seq
7011 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggcgaacccccgtcgccggaaccaccaccatctccaccgccacacacctcaac
ttccctttccccttccaactgatcaaatcagacaccatccctcctgccccgacccgaccc
gaatccaccatcgattggctaccggactatctagggcacgcatggatagcgtacgcagcc
tcttcgcttctcgtgatctccaactttccgtcaccgtcagttaccaacggaatatccggt
gatccggttttccggcaagtgattgaggtttcatccgacggttccggtgatgtgtccgcg
gtttcatggtctccgggttcgatgtgttgtggagaagtagctgcttctttggagaattgt
attggtgtgttttcacataattcagaaggttctttttgttggagccagactgcaatactc
gtgcacgccacaaacattgaggccatcaaatggaccggttccggagacggtctaatatca
gtcggaaccgatatcgttttatggagaaaaaacgtgctctcatgggaaatcgcttggaaa
tttaaacccgagtttctgcaatctttggtctccactacgtcaaccatcgaaggcccattt
gcaaccgcaccattaaataacgactcaccgtctgtgttaatatgtcacgggaaatcaaaa
tgcattaaagccgagctccaccatcacgtgccggtttccatgattcaatggagaccgttg
gtagcgaacgaatggaaagagacaccgaaacatccgttaaagctcgttttgttaacatgt
tgtgctgacggaaccgtaaggttgtggagtgagattgatgatgggcggggacggaagacc
gggaaggcccataatgatcagagaccacttgcgtcaacgtttcgagttgccgcaacaatc
gagataaatcaagcggtaaacggcattctcggttctaatgtatttgtcagatgggccacc
gagcttgatggtattgttaatatcggtaacgaaggtagtcagtactttccgtcagaagaa
tatcacctcggcaaaccgggaaaatgtgattggttaatatgtttcggtccgcaaacgctt
ataacgttctgggctgttcattgtatcgatgatatttccccattaaggtttccacgcgtt
acattatggaaaaaatgcgaattaccgagttgtaaaaccgaaacaagttttccgcttcac
aaatctatcatatcaagaaacgggttcttcggcccgccagacgtatcctccgtgattcac
ttattaccatctaatcatttaacgtggtcacagttctataaacaaacatcatcagaagat
tcggtttcggctattgctaacggaagtttaaacatagatggtcataccggaaagatttta
caaattgaattgcatccgtctgttagttatcccgaacttgcggtttcgttagatattaac
ggagtgattttattttggtcgttttccaatagtgctatcagtttaccgttgaacgatggc
tgcaagctttacggaaagtttgtagctcgtgattctcgatgcaaatacactaacttgagg
tgggcccctgcaataatagatgattgtaaggttctactgatggggcatgctgcaggcata
gattgttttttagtcaacgttagtcaaaatgaagattttatatcatgtaataaactatgt
actattccttttacgcctaatggcaatgaaaacggacccgcgagtatctggtcaattcct
ttgacttttaacaaatttatggtattagctgtacgcaaaggaaactttcaggcgttatca
tggaaaatcaccattcatccggcggaaatcagcttcaacgagactgtagaaactgccacg
tattcctttgaaagtgatatgtctggtaagaaatatcgtatacttgttgatcgttgctca
tcatcatttccaaatccgtacgatcatgacaacattacgagttttgctactggaatgttc
aacgatcatgttccgtatcacatggttaccggctgtttcgacggtagtttaaaactatgg
agaagtttagatcaagagtgggaattagtaggcgcggttgccgcacatgcagggcccgtc
acgagagttagtgtaaccgattgtggtcgaaagattgcaactatatctaacaaggacggg
tcaaatgaccacagtacccttcacatatgggaatctgtatacgttggagacgttggaagt
tttttacttgaagaaagtatacatcttgatggtacggtggttgcgttaaattggttaacg
ataggtaacggtcagttcttgcttggcgtttccttgcggaatgaactgcaggtgtactcc
atgaggcgttgtgaaggtgaaagttctgtaggttcgaaaaagtcaaaggatagaaacgtg
tggttttgtcttgcgaaaagtcaaactggtccgacaatctgcgatttcgtttgggggcct
aaagcaagttgtgtgatcgttcatgatgactacttttgtcttttcagccagtggttactc
ccacagagcaaaaaacacatgtcgaatagtggttctgatactcgtgatgttgaaaaattg
acatttaaggacggtaatgaaacatgcgtgtcaaacggtgttatgagaatgaacaaggag
aattgtatagtttcaagcgtttctgaaaactatgaacagaaatatgatatttttacggat
attggtctatcgagtattttggaaataacagcagatgttggtggctctctacctgcatat
caccctgaatcacttctagtcaatatttattcaggcaactggaagcgtgcacaaagcacc
ctgaaacatcttttggaacatctatcttctaataatgtagatttgaaaagaattccacaa
atgagcttgtcagactacattgaaggacttttttctgaaaagtcaaacaataaagcgtcg
ttcacatgggatgctaatataaatttagatcaattcagttattcttcatgggattctaat
ggttcgactaattcgacttccacacgatctggactgagtggactcgctaagttacttgag
aagttacatgacattttggtcattactgacactgaaaagatgcaaatacttgcggttgtc
gatcttcttgaagaaattagtaattcaaatgcgtcttcaccgtatggtggtcttgatgaa
tctggtcgaagattttgggttgcagtgaggtttcagcagttgtattgtgcaaggagagtc
gggaagttgccgttagtgggagagttgaccattgactcagcccttatcgcttgggctttc
cactctgattgtctagacagtttattcgattcttttctaaataacgattcatcttggcaa
gaaatgcgcaacatgggtattggatattggtacacaaataaatcacagttgcgagttaag
atggagaggctggcgaaacagcaatatttgaaaaataaggatccaaaagcttgcacgctt
ctttacgtagcgttaaacaggctgcaagttttggcaggtctttataaaattagtaaagac
gaaaaagacaagccgttagtggcatttctttcacgtaattttcaggatgagaaaaataag
gctgctgctttgaaaaacgcttacgtcttaatggggagacatcaactggagcttgcggta
gctttctttttgcttggaggtgataccgcttctgctattaacgtctgtactaaaactcta
ggagatgagcagcttgctcttgtaatttgtcgtcttattgaagggtataatggtccatct
gaacaccatcttatatccaagtttctgctaccatctgcttacgaaaatggtgactattgg
aaatcaagcattctcgagtgggttttggggaactactctaaagcttttacgagcatgctt
ggtgagcaagttacgtctccaagcgataaaccggccctcttgtccaaccatgcagcgttt
aacgattcaagtgtcggccaatattgcataatgttagcaaacaaaaaccagacgaagaat
gcaattggagaacgaaataccgcaactctatgtagatgggcagttttgatgagttctact
gcattaagccgatgcggtttacctgttgaagcgttggagtgcctgtcatcttctgtcagt
atattcaatggttccgaacaaaaaagtgtatcggataattcagaaattataattcttgat
gagagactgaatccatctgcgtattccgcaaattgggtatctggcgatgcggcttttcac
gttctctcacatgcaaagtacagtttcgcaatgcagtacgttacaaatttgttaacagaa
catccaagttggccacaaagcgtcacaccgtcatctgaaattccgtacaacgcactgctt
tcaacttttgaaaacaagttaaacgcagcgcttgcatattttgagcagaagtattccttg
actcgttaccatctgattaatatgattattgtttctttgtacaaccacggcctcatgttc
atcggtagccatatgttgcaacacgagcgttttgcgttaaacagaaatccatcctaccct
acactaccaacgctccttttaaagggtatcgaggatttctcgtttttattctcgaaatat
aacatggtttgtatgatgaattgctgcaacaccgaaccgcattccactcagacaaatatg
gtaactgggaatcgcggttctcggttaagctcatgcgggatttatatgaaggatttattg
tccctcatctcaaagttaaaaagtggactgaaactcgttggtgattcttatgccgaatgt
tttctcgacttatgtgaatattacatatatttcacgtctgcatggtttcaaaaaaatccg
aagagcgttatttttgttttgaaaccgatcttgcttacgtattccaatgaatcggtaacg
ttcaactccaacatgaaaattataaatgattttcttccgaaactatctgagttgttggat
caccatgagatttccgttcagaccgttggattaacggtaaatgacgaaaacagtcatggc
atacctgaaaaagataaatggcaaattatacgggcttctttgtgcggcctcatgtcggga
tttctgaaacaccaaatcgatttgttacccgagaatcttgaagataattactccttggct
aaattgctgaaagtggaatcagaacacgcgttatcgtattgtgcgaaacagctggcatcg
ttcctgctgcagaaagtgaaagatcaatcgaacgagtctacaattctgtggttagagaat
ttgtgtaggtcaacaccaataaccaattatcggggtcttggtcaaggtgttgactttgac
tttaatctttctagagtactgaataatgaagaaggattgtcgacatttgaagtgctatgg
agtatgtttgacgatgaaaaaatgctatgtggagattttgcagtggaatattcgaaatgg
tcgcaacttattaaacaaaaacatacgaaaggatggaatgatgtttatacaagcatcaca
ggggatcatgaaccctctgaaaatgacgatcgagaagctgttgaccattctattgacctt
tccgttgaccatagagacccagatataaagatgaaacactctccttttcagaagcctaaa
gaagtacataaaataaatggagaactgctcgaggcattgtgcatcaactccattgatcaa
caacaagctgcaattgcttgcaataaaaaggggataatcttttataactgggaagacggg
cggtcttcctttgacaagtcaaactatatctggacagatgttgactggccaactgacgga
tgggctggatccgagtccactccagttccgacatgtgtttctcccggaattggtcttggt
agccgaaaagggacccaccttggtttgggtggggcgacaataggtgtcggtttagcaaaa
ccagtaagcacatctagtcttggttgggaaattcaacaagattttgaagaacttgttgat
ccacctgcaaccgtagataatattagaacacgcgctttctcaagtcacccttcaaggcct
ttcttcttagttggttcaagcaatacacatgtgtatctatgggagtttggtaaaaataca
gctacggctacgtatggagttcttcctgctgcaaatgtcccaccgccgtatgctcttgca
tcgatctcagccgtccattttgatcattgtgggcagcgattcgccacagcagcgtcggat
ggaacagtgtgcacttggcagcttgaggttggaggaagaagcaatgttcgtccaactgaa
tcgtctctctgttttaacaactacacgtcggatgttacatatgttacttcaagtgggtca
attgtggctgcagtaggttatagttccaataacgttaacgttgttatatgggatacactt
gctccaccgaccacatcccgagcttccattatgtgtcatgaaggtggtgcgcggtccatt
tgtgtgtttgctgatgagatgggaagcggttcggtttctccgctaatcgtgacaggtgga
aaaggcggagatgtcggagttcatgatttccgttacatagccacccgaagaccaaaaaaa
cacacgaattctgataacgatgaacaaaagttcagtgcatcttcaaccgcaggcttgcat
aataaacacggggatcaaaatcgaaatggaatgttgtggtacataccaaaagctcactct
gggagtgtaacaagaatatcggctattccgaatacgagttttttcttaactggaagtaaa
gatggagatgtaaagctatgggatgctaagagggcaaaattggtatatcactggccaaaa
atgcacgatagacacaccttcattcaacctagctctagaggatttggaggagttgttagg
tttgaaacactgcaggctgctgtgacagatattcaagttgtttcaaatggttttctttca
tgtggtggtgatggttcagttaagctggttcaacttagagatttactataa
DBGET
integrated database retrieval system
